Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06864 ATGGAACCTTTCTTCCTTTCCTCTCTCTCACTCTTCTTCCTACTTTTCTTCACTTTTTCTTCTGCTCAGATGCCAGGTTTTGTGAGTTTGGACTGTGGAGGTGATAAGAATTTCACTGATGAAATTGGTCTTAAATGGACTCCTGATGATAAGATTGCTTATGGTGAAATAAGCGCGATTTCGGTTGCGAATGAGACACGGAAGCAATACACGACGCTTCGAAACTTTCCTGCTGATTCCAGAAAATACTGCTACACACTTGATGTTGTTAGCAGGACAAGGTATCTACTGAGGGCAACATTCTTGTATGGAAATTTTGATAACAACAATGTTTATCCGAAATTTGATATTTCGATTGGGGCTACTCAATGGTCTACTATTGTTATATCGGATGCGAATACGATAGAAGTAAGGGAAATTATATTTTTGGCTTCTAGTCCTACTGTTAGTGTATGTCTGTCGAATGCAACAACGGGGCAACCGTTCATATCTACGCTTGAACTGAGACAGTTTAATGGTTCGGTTTATTTTTCGTTCTACGAGGAACATTTCTACCTCAGCGTCTCTGCGAGGATAAATTTCGGTGCAGAGACGGACGAGCCAATCAGGTATCCTGATGACCCGTTTGATAGAATTTGGGAGTCGGATTCTGTCAAGAAAGCGAATTACCTCGTCGATGTTGCTGATGGAACTGAGAAAATTTCGACCAATGTATCCATTGATGTCAAGAGAGATGAAATGCCACCGGTGAAAGTAATGCAGACAGCGGTAGTAGGTACGAATGGATCTCTAACGTACCGATTAAACTTGGATGGTTTTCCTGCTATTGGACGAGCGTACAGCTATCTTGCAGAGATAGAAGATTTTCCTAGAAACGAATCGAGAAAATTCAGGCTAGTACTTCCAGGCCAGGCTGATATTAGTAAAGCCGTGGTAAATATTGAAGAGAACGCTCTAGGAAAATATCGCGTTTATGAGCCTGGGTTTAACAATATATCGCTACCTTTTGTAATGTCGTTTAAGTTAGGCAAAACAGCTGATTCTTCTCGAGGTCCTCTTCTAAATGCCATGGAGATTAATAAGTATCTCGAGAAAAATGACGGTTCTCCTGATGGAGAAGCTATATCTAGTGTGATTTCTCAATACTCTTCAAAAGATTGGGCAAACGAAGGGGGTGATCCGTGTTTACCTGTCCCGTGGTCGTGGATCCTATGTAGCTCGGATCAACAGCCGAGAATAGTTTCAATTTTGTTGTCTGGGAAAAATTTGACGGGCGATATTCCTTTGGACATCGCTAAATTGACTGGTCTGGTTGAACTATGGCTTGATGGCAATATGCTGACAGGCCCGGTACCAGATTTCACCGGATGCGTGGACTTAAAGATCATTCATCTTGAGAACAACCACTTGGCAGGTGTGCTTCCGGCATCTTTGGGGAACCTTCCGAATTTGAGGGAACTGTATGTTCAGAATAATATGTTATCTGGAACCGTACCGTCTGAACTTTTGAGCAGAAATTTGGTTTTAAACTACTCTGGAAACAACGATCTTCATAAGGGAAGCCGAAAAAAGGACCAACTGTATGTGATTATTGGTTCAGCAGCTGGCGCCGCCATTTTACTTTTAGCTACTATCATATCTTGCTTGTTTATGCACAAAGGAAAGAAAAAATATTATGATCAAGACCACCTTATTTCACTCGCTAATCAAAAAAACCCGGAATCTAAGAGTGATGGTCATGCAGAAGTTGCTCACTGCTTCAGCTTTTCTGAAATTAAAAAGTATACGAACAATTTCGAGAAAAAAATTGGTTCAGGAGGTTTTGGAGTTGTTTACTATGGGAAACAGACAAATGGAAAAGAGATAGCAGTTAAGGTTTTAACTAGTAATACCTATCAAGGCAAAAAAGAGTTCTCTAATGAGGTGAGTCTTTTGTCGAGAATTCATCACAGAAATTTGGTGCAGCTTCTCGGTTATTGCCGAGAAGAAGGAAACAGTATGCTTATTTACGAGTTCATGCATAACGGAACTCTCAAGGAACATCTTTATGGCCCGTTAACACACGGACGGAGTATCAACTGGATTCAGCGACTTGAAATCGCCGAAGATTCTGCGAAAGGTATTGAGTATCTTCACACAGGATGTGTCCCTGCAGTTATCCACAGAGACCTAAAAAGCAGCAACATTCTTCTAGACAGACACATGAGAGCTAAGGTTTCGGATTTTGGTCTTTCCAAACTCAATGTTGATGGAGTCTCTCATGTGTCTAGCATAGTTCGTGGTACAGTAGGATATCTAGATCCCGAGTACTATATTTCTCAGCAGTTGACTGACAAGAGTGATATTTATAGTTTTGGCGTAATTCTTCTTGAACTCATATCAGGTCAAGAAGCAATATCTAATGACAGTTTCGGTGCTAATTGCAGAAACATAGTCCAATGGGCAAAGTTGCATATTGAGAGTGGTGATATACAAGGTATAATTGATCCAGCCTTACGCAACGGCTATGATCTACAATCGATGTGGAAAATAGCGGAGAAATCATTGATGTGCGTTCAACCTCATGGACACATGCGGCCATCGATATCAGAAGTTGTGAAGGAAATTCAAGACGCGATTGCGATTGAAAGAGAGGTGGAGAGTGTTTCGGATGAGATGACGAGAAATTCAGTTCACTCTTCGATTAATATGGGTTCTATGGATCTCGCTGCTACGGAGAATTACCTCGCGATTGATGATTCCATTGCACGCCCTACTGCACGATAG 2766 0.4132 MEPFFLSSLSLFFLLFFTFSSAQMPGFVSLDCGGDKNFTDEIGLKWTPDDKIAYGEISAISVANETRKQYTTLRNFPADSRKYCYTLDVVSRTRYLLRATFLYGNFDNNNVYPKFDISIGATQWSTIVISDANTIEVREIIFLASSPTVSVCLSNATTGQPFISTLELRQFNGSVYFSFYEEHFYLSVSARINFGAETDEPIRYPDDPFDRIWESDSVKKANYLVDVADGTEKISTNVSIDVKRDEMPPVKVMQTAVVGTNGSLTYRLNLDGFPAIGRAYSYLAEIEDFPRNESRKFRLVLPGQADISKAVVNIEENALGKYRVYEPGFNNISLPFVMSFKLGKTADSSRGPLLNAMEINKYLEKNDGSPDGEAISSVISQYSSKDWANEGGDPCLPVPWSWILCSSDQQPRIVSILLSGKNLTGDIPLDIAKLTGLVELWLDGNMLTGPVPDFTGCVDLKIIHLENNHLAGVLPASLGNLPNLRELYVQNNMLSGTVPSELLSRNLVLNYSGNNDLHKGSRKKDQLYVIIGSAAGAAILLLATIISCLFMHKGKKKYYDQDHLISLANQKNPESKSDGHAEVAHCFSFSEIKKYTNNFEKKIGSGGFGVVYYGKQTNGKEIAVKVLTSNTYQGKKEFSNEVSLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWIQRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDRHMRAKVSDFGLSKLNVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPALRNGYDLQSMWKIAEKSLMCVQPHGHMRPSISEVVKEIQDAIAIEREVESVSDEMTRNSVHSSINMGSMDLAATENYLAIDDSIARPTAR 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06864 921 Pfam Protein tyrosine and serine/threonine kinase 599 799 IPR001245 GO:0004672|GO:0006468
Vivi1g06864 921 Gene3D Ribonuclease Inhibitor 374 525 IPR032675 -
Vivi1g06864 921 Gene3D Transferase(Phosphotransferase) domain 1 673 895 - -
Vivi1g06864 921 FunFam Leucine-rich repeat receptor-like protein kinase 572 672 - -
Vivi1g06864 921 Pfam Malectin-like domain 30 360 IPR024788 -
Vivi1g06864 921 Gene3D Phosphorylase Kinase; domain 1 569 672 - -
Vivi1g06864 921 SMART serkin_6 597 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06864 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 719 731 IPR008271 GO:0004672|GO:0006468
Vivi1g06864 921 SUPERFAMILY L domain-like 398 515 - -
Vivi1g06864 921 ProSiteProfiles Protein kinase domain profile. 597 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06864 921 FunFam Leucine-rich repeat protein kinase family protein 373 522 - -
Vivi1g06864 921 SUPERFAMILY Protein kinase-like (PK-like) 580 867 IPR011009 -
Vivi1g06864 921 PANTHER OS07G0107800 PROTEIN-RELATED 460 873 - -
Vivi1g06864 921 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 673 882 - -
Vivi1g06864 921 CDD STKc_IRAK 603 870 - -
Vivi1g06864 921 ProSitePatterns Protein kinases ATP-binding region signature. 603 625 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06864 Vivi-Chr1 162605616 162610064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06864 17 707 Receptor kinase-like Gene Family AT2G37050 65.903 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi1g06864 Malectin_like 8.8e-77 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06864 - - gmx:100798007 1540.01