Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06842 ATGGCCACTGTCACCGTTCGTCCTCCCGCGCTAACTTCAACTTCGGAGCCACCTCCGATTTTTGATGGAACCACCAGGTTGTACATCAGTTATACTTGCCCCTTTGCACAACGTGCATGGATCACTAGGAACTACAAGGGACTACAAGACAAGATTGAGTTGGTTCCTATTGACCTTCAAAACAGGCCTGCATGGTATAAGGAAAAATTATATCCTGAGAATAAGGTGCCATCTTTGGAGCATAATGGCAAGGTATTGGGAGAAAGTCTTGATTTAGTCAAATATCTTGATGCCAACTTTGAAGGAACACCTCTCTCTCCCAATGATCCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTAACCCATGTTGACACCTTTGTCAAAGACTTGTTTGGCTCATTCAAAGGGGATACTGTGCAACAAGCCAGTTCTACTGTTGACTTCTTGGAGAATGCCCTTGGTAAATTTGATGATGGGCCATTCCTTCTTGGTCAATTCAGCTTGGTCGATATTGCATATGTTCCGTTCGTTGAAAGATTCCACATTGTCCTTGCTGAGTTGTTCAAGTATAACATCACTGAAGGAAGACCTAAGCTTGCAACATGGATTGAGGAGCTGAACAAGATTGATGCTTATACACAGACAAAAGTGGATCCTCAAACACTTGTTGATAGTTACAAGAAAAAATTTCTGCTTCAACAGTGA 705 0.4255 MATVTVRPPALTSTSEPPPIFDGTTRLYISYTCPFAQRAWITRNYKGLQDKIELVPIDLQNRPAWYKEKLYPENKVPSLEHNGKVLGESLDLVKYLDANFEGTPLSPNDPAKKEFAEQLLTHVDTFVKDLFGSFKGDTVQQASSTVDFLENALGKFDDGPFLLGQFSLVDIAYVPFVERFHIVLAELFKYNITEGRPKLATWIEELNKIDAYTQTKVDPQTLVDSYKKKFLLQQ 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06842 234 FunFam Lambda class glutathione S-transferase 102 233 - -
Vivi1g06842 234 Pfam Glutathione S-transferase, C-terminal domain 139 204 - -
Vivi1g06842 234 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Vivi1g06842 234 SFLD Main (cytGST) 26 207 - -
Vivi1g06842 234 CDD GST_C_Lambda 109 227 - -
Vivi1g06842 234 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 230 IPR044629 GO:0004364
Vivi1g06842 234 SUPERFAMILY GST C-terminal domain-like 100 229 IPR036282 -
Vivi1g06842 234 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Vivi1g06842 234 FunFam Glutathione S-transferase L2, chloroplastic 1 101 - -
Vivi1g06842 234 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Vivi1g06842 234 Gene3D Glutaredoxin 2 101 - -
Vivi1g06842 234 Gene3D - 102 233 - -
Vivi1g06842 234 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06842 Vivi-Chr1 161839483 161842117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06842 4 231 Glutathione S-transferase Gene Family AT5G02790 66.228 3.95e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06842 K00799 - gmx:547597 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03702 6 131736503 131739321 Vivi1g06842 1 161839483 161842117 PCT