Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06830 ATGACTTCTATCACCGTTCGTCCTCCCGCGCTAACTTCAACTTCGGAGCCACCTCCGATTTTTGATGGCACCACAAGGTTGTACATCAGTTACACTTGCCCCTTTGCACAACGTGTATGGGTCACTAGAAACTACAAGGGACTACAAGACAAGATTGAATTGGTTGCTATTGACCTGCAAAACAGGCCTGCATGGTATAAGGAAAAAGTATACCCTGAGAATAAGGTGCCATCTTTGGAGCACAATGGCAAGGTATTGGGAGAAAGTCTTGATTTAGTCAAATATGTGGATGCCAACTTTGAAGGAACACCTCTCTCTCCCAATGATCCTGCCAAGAAAGAGTTTGCTGAGCAGTTGTTATCCCATTCTGATACCTTTGTCCAAGAGTTGTTCGGCTCATTCAAAGGGGATACTGTGCAAAAAACCAGTTCTGCTGTTGACTACTTGGAGAATGCCCTTGGTAGATTTGATGATGGGCCATTCCTTCTTGGTCAATTCAGTTTGGTGGATATTGTGTATATTCCGTTTGTGGAAAGATTCCAAGTTTTCCTTGCTGAGTTGTTCAAGTATAACATCACAGAGGGAAGACCTAAACTTGCAACATGGATTGAGGAGCTGAACAAAATTGATGCTTATACACAGACAAAAGTGGATCCTCAAGCACTTGTTGATACTTACAAGAATCGTTTTCTGGAACTGAACAAAATTGATGCTTAA 717 0.4226 MTSITVRPPALTSTSEPPPIFDGTTRLYISYTCPFAQRVWVTRNYKGLQDKIELVAIDLQNRPAWYKEKVYPENKVPSLEHNGKVLGESLDLVKYVDANFEGTPLSPNDPAKKEFAEQLLSHSDTFVQELFGSFKGDTVQKTSSAVDYLENALGRFDDGPFLLGQFSLVDIVYIPFVERFQVFLAELFKYNITEGRPKLATWIEELNKIDAYTQTKVDPQALVDTYKNRFLELNKIDA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06830 238 Pfam Glutathione S-transferase, C-terminal domain 139 204 - -
Vivi1g06830 238 Gene3D - 102 233 - -
Vivi1g06830 238 FunFam Lambda class glutathione S-transferase 102 233 - -
Vivi1g06830 238 FunFam Glutathione S-transferase L2, chloroplastic 1 101 - -
Vivi1g06830 238 CDD GST_C_Lambda 109 227 - -
Vivi1g06830 238 Gene3D Glutaredoxin 2 101 - -
Vivi1g06830 238 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Vivi1g06830 238 SFLD Glutathione Transferase (cytosolic) 26 207 IPR040079 -
Vivi1g06830 238 PANTHER GLUTATHIONE S-TRANSFERASE L1 5 230 IPR044629 GO:0004364
Vivi1g06830 238 SUPERFAMILY Thioredoxin-like 15 105 IPR036249 -
Vivi1g06830 238 Pfam Glutathione S-transferase, N-terminal domain 27 103 IPR004045 -
Vivi1g06830 238 SFLD Main (cytGST) 26 207 - -
Vivi1g06830 238 SUPERFAMILY GST C-terminal domain-like 100 230 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06830 Vivi-Chr1 161576069 161578550 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06830 7 231 Glutathione S-transferase Gene Family AT5G02790 65.333 7.06e-114 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06830 K00799 - gmx:547597 382.489