Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06815 ATGGAGAGTTGGGAAACACTATCCTCTTGGCTAGCAAAAGGAATACCATTCATTGCTGTCATTTTCATACAAATGTCATCTGCAGCTTTGAACACCATGACAAAAATATCCCTGGACCATGGCATGCACACTTTCGTCTTTGTTGTCTATCGACACGCCATTGCTTTCATGGTAATTACGCCATTCGCACTTCTATATGAAAGGAAATTAAGACCAAGAATGACGTTCTCAATTTTCTGGAAGATATTCGTTCTCAGTTGGCTAGAGCCTGTTATCGACCAAAATTTATTCTTTTTGGGGATGCATTCTACGACTGCCACATATGCCACTGCAATGGCTAATAGCATTCCTGCGCTTACCTTTGTACTAGCTTTCCTTTTAAGGTTGGAGAAGATAAACCTTAGAAATAGACGAAGTCAAGCCAAGTTGTTAGGCACTATAGTCACGATCTCAGGAGCTATGGTGATGACCTTTATTAAAGGCCCGGTTCTATTTGGTGTCATTGGAGAAAACAACAACAATAATCACGATGGAGATTCACATGTTTTATTTGGATCATTGCTCGTTTTTACATCATGTACGGGTTGTGCCGTCTTTATAATTATACAAGCTATTACACTAGAGTCTTATCCAGCAGGACTCTCCTTGACCTCATTGATATGCTTCATGGGTACCGTAGAAGGCCTAGGAGTTGCTTTTATGATGGGAAAAAGAATCCCTCATGCAGCTTGGTTGATTTTCAAGTGGGACATAAAATTGATGTCGGCTATTTATGCGGGGGTAGTTTCCTCCGGCATAGGATATTTTCTCCAGGGAGTGATTATGAAAGCGAAGGGACCCGTTTTTTTTACCGCATTCAATCCATTAGGCATGATAATGGTTGCTGCGGTGGGTTCCATATTGGGGGAACAAATCCTACTTGGAAGGGCAATTGGAGCATTTATAATCTGTCTGGGATTATTCAGTGTAGTTTGGGGTAAGAGTGGCGATGATAATAACTTGTCACGTGAAAAGGATGAAGTGAGTTCTGAAGAGTTGAAAGAGGCACACCGTGAATATTCAGGAGACAAAATTACAGATGAGTTGGTATAG 1092 0.4112 MESWETLSSWLAKGIPFIAVIFIQMSSAALNTMTKISLDHGMHTFVFVVYRHAIAFMVITPFALLYERKLRPRMTFSIFWKIFVLSWLEPVIDQNLFFLGMHSTTATYATAMANSIPALTFVLAFLLRLEKINLRNRRSQAKLLGTIVTISGAMVMTFIKGPVLFGVIGENNNNNHDGDSHVLFGSLLVFTSCTGCAVFIIIQAITLESYPAGLSLTSLICFMGTVEGLGVAFMMGKRIPHAAWLIFKWDIKLMSAIYAGVVSSGIGYFLQGVIMKAKGPVFFTAFNPLGMIMVAAVGSILGEQILLGRAIGAFIICLGLFSVVWGKSGDDNNLSREKDEVSSEELKEAHREYSGDKITDELV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06815 363 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Vivi1g06815 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 158 - -
Vivi1g06815 363 PANTHER WAT1-RELATED PROTEIN 16 331 IPR030184 GO:0016020|GO:0022857
Vivi1g06815 363 MobiDBLite consensus disorder prediction 332 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06815 Vivi-Chr1 160992231 160999415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06815 11 363 Nodulin-like Gene Family AT2G37460 47.514 7.52e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06815 - - vvo:131658356 395.971