Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06795 ATGAAAATATTTTGCTTGAATCCTAAAACACCGTCGTTTTCAATATACCGAAACAGTTCACCATCCTCAATATCAAGTTCATCTACAACCACAACTCCTTCAATCAGAAAAGCTACAGCACGCATAGAAGCAGCAAAAGCGCTTATATCAAAATGGAACTCCGAAACTTCAGATTACGCCAAAGTAACTTCTCTCTTCTACGTCAACAAAGACGAAGCCATTCAATACATTCAGTGTGTTAACCACCTTCAAAGAGCAATGCATTCGTTACTCAAACTAGAGCCATTTTCGCAGAAACTCATCCATGCACAAAACCTAATGCAAATTGCCATGAAGAGACTACAGAAAGAGTTCTACCAGATATTATCCGCGAACCGGGCTCACCTTGATCCCGAATCCGTTGGATCCTCCGACACTTCCTTCAGTTCTTACGACTATGGAGGAGAGGAAAAAGATACTGGAACTGCAGCGGAACGTATCTCCGAAGTCGAACGTGTTTCTTGTGACATGGTTGATGATTTGAGAATTATTGCTGATTGTATGGTTTCTAATGGTTACGCAAAGGAATGTGTAAAGGTTTATACTAAAGTGAGAAAATCAATTATTGATGAAAGCATTTATAAACTCAACGTGGAGGAACGAAGCTTCTCGAAGGTGAATAAGATGGATTGGAAAATTCTTGAGATGAAAATCAAGAGTTGGTTAGAGGCGGTTAGGATTTCAGTGAGAACACTCTTCATCGGAGAGAGAAATTTCTGCGATGGGATTTTCGCTTCTAGATCCATGAGAGAAGCTTGCTTTGGTGAGATATCGAGAGATGGAGCTATTCTTTTGTTCAGATTTCCTGAACTCGTCACCAAATCAAAGAAATCAATGCCAGATATGATTTTCCTTGTGCTCGACATGTACACTGCAATCACCGTGTTGTTGCCGGAGATTGAATCGATCTTCTTGTTTGATTCAACCGCAGCTGTTAAATCTCAAGCATACAATTCGCAACAACGACTCGCGGAGTCGGTAAGGAAGATACTCTCAGAATTCGAATACACAATGTTGAAGAACACTTCCAAATTGACGGCGAATCTCGGGGAATTTCATTCTCTGACGACTCGAACAATGCAGTACCTCACTCGTCTTGCAGATTACAATCATGTGCTCTCTGAAATATTCTTGGACATTCGTCCGTCGTCGATGACATCTGCATTGCCGGAATCTTATTCATACAGTCTAGAATTATCCAACAACATGACGGATATTTCAATCGGATTTTCAGTTCAAATGACTCGGCTGATTGAAGTTCTTCTTTCCGAAATCGACAGAAAATCAAATCAATGTATGGATCTATCGTTGTGTTATCTATGTCTCGCAAACAATCTCTGGCACGTCGTGGAAAAGATACGTGCGACGAATTTACAAGATGTTCTGGGGGATGATTGGTTGTTGAGGCACATATCAAAGGTGAAAAGGTTGATGGAGAACTACGAGAGGGTAGCGTGGGATGAAGTTTTTTCCTCATTGCCGGAAAATCCAACAACAATATCAGTGGCGGAGGTGAGAGGGGTGTTTATGAAATTTAGTCTGGAATTCGAGAGAGCTTATCAGAAACAGAATTCATTTGTCGTGCCAGAATCGGAATTTCGCGAAGATATAAGAGCGTCTCTAGAGAGAAAACTAATTCCGATTTATCGCGAGTTGTATGATACATATGGGAGGATTATGGCAGGAAGATCACTTACTGAAATGAATGAATGTGTTGTTTTTACGCCTGAAGATGTTCAGAAATTCCTGGGGAATCTCTTCTCATGTGGAAAAGTTTAG 1818 0.4076 MKIFCLNPKTPSFSIYRNSSPSSISSSSTTTTPSIRKATARIEAAKALISKWNSETSDYAKVTSLFYVNKDEAIQYIQCVNHLQRAMHSLLKLEPFSQKLIHAQNLMQIAMKRLQKEFYQILSANRAHLDPESVGSSDTSFSSYDYGGEEKDTGTAAERISEVERVSCDMVDDLRIIADCMVSNGYAKECVKVYTKVRKSIIDESIYKLNVEERSFSKVNKMDWKILEMKIKSWLEAVRISVRTLFIGERNFCDGIFASRSMREACFGEISRDGAILLFRFPELVTKSKKSMPDMIFLVLDMYTAITVLLPEIESIFLFDSTAAVKSQAYNSQQRLAESVRKILSEFEYTMLKNTSKLTANLGEFHSLTTRTMQYLTRLADYNHVLSEIFLDIRPSSMTSALPESYSYSLELSNNMTDISIGFSVQMTRLIEVLLSEIDRKSNQCMDLSLCYLCLANNLWHVVEKIRATNLQDVLGDDWLLRHISKVKRLMENYERVAWDEVFSSLPENPTTISVAEVRGVFMKFSLEFERAYQKQNSFVVPESEFREDIRASLERKLIPIYRELYDTYGRIMAGRSLTEMNECVVFTPEDVQKFLGNLFSCGKV 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06795 605 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 600 IPR004140 GO:0000145|GO:0006887
Vivi1g06795 605 Pfam Exo70 exocyst complex subunit 232 596 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi1g06795 605 Gene3D Exocyst complex component Exo70 54 604 - -
Vivi1g06795 605 Coils Coil 35 55 - -
Vivi1g06795 605 SUPERFAMILY Cullin repeat-like 40 600 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06795 Vivi-Chr1 160498164 160499981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06795 42 600 EXO70 exocyst subunit family AT3G09520 46.503 8.59e-170 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06795 K07195 - gmx:100798477 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06795 1 160498164 160499981 Vivi1g06795 1 160498164 160499981 ECH