Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06791 ATGTCACCAATGACTGAAACCAAGAGAAGACCTCCAGGTGTTATAGCCAGATTGATGGGTCTTGACGGGCTTCCGTCCCAGCATCTGCATAAGCCGGTGCCTTTAGAGAAGACTCAAAGCAGAGGATTGTCAAATGAAGGTCGGTCCTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGTGGTAGGCATTCGTCTTCAGACTTCAAGGCTCATGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGAATGCCAAACGCCTTGCAACTTATCAGGATTATCAGTCTTCTAAGGAATTCCATGAGACACTTGAGGTTTTGGACTCGAACAAGGATCTTCTGCTAAAATATCTTAAGCAGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTACAAGGTTCCCCTTTTCAATCACATTCCGGTCATGTAGCACCACCCAATATGGAGAACTTTGACCATGGTTTAAATTGGAGATCAGATAAGGAGGCACAACATGTGAATTACAATAGGTTTCATCAGAAGCACTCTGATGATTATCACAACCAATTTGACAAAAGGCGTGTGATGCAGAATCCACCAAGATCATCAAAGCACCGGTTTAAGGGTAGCCGTGAACAATCTGCAGTCGCGACAAAGATTGTTGTCCTAAAGCCGAATCTTGGAAAATTACAGAATGGTACCAAAATTCAATCATCACCTTGTTCTCCGCATAACTTTCTGTCAGAACATGGAAATCAGGTTGAATTTTCAGATGTCAGATTTAGAGATGCTGAACTGTATAAAAAAATTAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCTTTAGAATCTACAGAAATTGCAAAAGAAGTAACTAGGCAAATGAAAAACAGTCTGAGCAGAGGTTGTATGATGTCTTCCTCTTCTAGATTTAAAGGATGTACTAGAAGCGATAGTTCAAGCAGTGCTTCTGGGAACGAATCTCCAGAGGAAATAACAGCGCCTATCGGTGACCCATTTGACTTAAGTAAACGTAGCAGGCGCTCACCGCGTTCTACTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAATCCCAAGAGGTGCAAGGCTCGAGCAGGAGCAGCACACTGGCTGATATGCTAGCATTCCCTGGTAAAAAGGGTACACGATTTGACAGCATGGCAAATGGGGGAGGTTTCTATGATAAGTTTGCTCGTAATGGTGAACCTTCTGGGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATCTATTGGAAGTTTGTCGAGGTCAAAATCTCTTCCTGCATCATCTACTGTTTTTGGAAATGCTAGAACATTTATGTGTGCTGAAGCCCTTCGTAATGATCGATATATGGGGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCTACAATGAGTCTTGATCATAGACATGGTTTGAATTCTAGAAGCACTATATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATCGAAGCAGGAAGTTAATGAGTTCTCTCCAGACTTAAATGCAGTTGAAAATAACATAATGATCAATCTTGAAGAAGATTCACCCAATCTAGAGGTTCATTCTCCTGAAACCTTTGGCCAACGCCTTAGAAATACAAGTGTTGTTAGCGATGATGTCGTGGATGTAGCAAATGGAAACACAGATGGGTCTTTTGAACCTTCTTCGGATAAAGTGCTTCCTGGAACATCATCCTGTGTCTTAATAAAAGGAGACAGTAGTGGTGTTGAAGACAATTCAATGCAAGAGGAAGTATCAGCTGGTTCTACAGGTGGAATTTCAGTCCTCTCTGAAGCACCTGCACCTGGACTTGAATCGCCATGCTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTCTAGATCCTTCTTTTACAGATGATGTGTCATCTTGTTCTGAATGTTTTGGGAGTGTCAGTGCTGACCTACAAGGGCTTAGAATGCAACTCCAGTTGCTGAAGTTAGAATCTGAAGAACATGTGGAGGGACCTATGCAAATTTCAAGTGATGAAGATGGTGTGGAAGCATATGCTGAAATGTTAGAAGAAAATGCATTACGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAATCTGCCATCGATAAGGGTCAAACTCATAATATTTTGGAAGTTTGGCATTCTCTAGAATGCCCTGTTAGTCTGTCTGTATTTGAAAAACTTGAAGAAGAGAGGTACAGTGATTGGACTATTTGTTCAAAGTCTGAAAGGAGAATGCTTTTCGACCGCATCAATTCAGGAATTGTCAAAATTCACGAGCAATCTGCTGACCCACAACCATGGGTGGGTAATGCAGGCAAAACTTTTGGATCAAAAAGGTTTACTGGGCTCCAAGATGGTATTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAGGATGATGCCCTGGGTAAGTTGCTGGTTGTGGAGTCTCAATGGTTGGGTTTGAGAGATGACATTGATGTAATAGGAAGAGAAGTTGAGATATTGATATTAGATGATTTAGTGGCAGAAATAGTTGGTATCTAA 2652 0.4201 MSPMTETKRRPPGVIARLMGLDGLPSQHLHKPVPLEKTQSRGLSNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRHSSSDFKAHEDEMSFIEQKFMNAKRLATYQDYQSSKEFHETLEVLDSNKDLLLKYLKQPDSLFKKHLNDLQGSPFQSHSGHVAPPNMENFDHGLNWRSDKEAQHVNYNRFHQKHSDDYHNQFDKRRVMQNPPRSSKHRFKGSREQSAVATKIVVLKPNLGKLQNGTKIQSSPCSPHNFLSEHGNQVEFSDVRFRDAELYKKINLPDSARSFRHNSLESTEIAKEVTRQMKNSLSRGCMMSSSSRFKGCTRSDSSSSASGNESPEEITAPIGDPFDLSKRSRRSPRSTESSVSREAKKRLSERWKMAHKSQEVQGSSRSSTLADMLAFPGKKGTRFDSMANGGGFYDKFARNGEPSGWVEPLGISSKDGWRDASIGSLSRSKSLPASSTVFGNARTFMCAEALRNDRYMGPKDLKRERRRATMSLDHRHGLNSRSTISGHKKSWSLLSSKQEVNEFSPDLNAVENNIMINLEEDSPNLEVHSPETFGQRLRNTSVVSDDVVDVANGNTDGSFEPSSDKVLPGTSSCVLIKGDSSGVEDNSMQEEVSAGSTGGISVLSEAPAPGLESPCCKDADQPSPISVLDPSFTDDVSSCSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMQISSDEDGVEAYAEMLEENALRRTEDSWESSYIIDVLSESAIDKGQTHNILEVWHSLECPVSLSVFEKLEEERYSDWTICSKSERRMLFDRINSGIVKIHEQSADPQPWVGNAGKTFGSKRFTGLQDGIFQMLGSQGKVEDDALGKLLVVESQWLGLRDDIDVIGREVEILILDDLVAEIVGI 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06791 883 MobiDBLite consensus disorder prediction 48 82 - -
Vivi1g06791 883 MobiDBLite consensus disorder prediction 308 395 - -
Vivi1g06791 883 Pfam Domain of unknown function (DUF4378) 730 879 IPR025486 -
Vivi1g06791 883 MobiDBLite consensus disorder prediction 351 384 - -
Vivi1g06791 883 Pfam DUF761-associated sequence motif 7 28 IPR032795 -
Vivi1g06791 883 PANTHER AFADIN 1 881 - -
Vivi1g06791 883 MobiDBLite consensus disorder prediction 20 82 - -
Vivi1g06791 883 Pfam Protein of unknown function (DUF3741) 93 137 IPR022212 -
Vivi1g06791 883 MobiDBLite consensus disorder prediction 308 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06791 Vivi-Chr1 160326145 160331536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06791 1 881 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.439 1.37e-115 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06791 - - ccaj:109788117 1057.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06791 1 160326145 160331536 Vivi1g06791 1 160326145 160331536 ECH