Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06790 ATGGACAAAATCAAAATCAAATCTCATCGCACCAACTCCAAACTTCATCTTCCTCAAGGGAAAGATCAGATTCATAAACAGCGACATCATCAAGATTTGTCACCTGATTCTAGCTCTTCCAGTGGCGGGGTTGGAGACAAAGATTCGTTCTCATTTAAATTTGGGTGGAAATCTTCTAAACAATCGGTTGGAACTCCGATTAAGAAGTTATTAGCTGAAGAGATGTCACCAATGACTGAAACCAAGAGAAGACCTCCAGGTGTTATAGCCAGATTGATGGGTCTTGACGGGCTTCCGTCCCAGCATCTGCATAAGCCGGTGCCTTTAGAGAAGACTCAAAGCAGAGGATTGTCAAATGAAGGTCGGTCCTCTAGGAGAAGCTCAAGGGATCAGGAAGAATTTAAGGATGTATTTGAGGTCTCAGAGATCCCGAAGGTAGAGAGTGGTAGGCATTCGTCTTCAGACTTCAAGGCTCATGAAGATGAAATGTCATTCATTGAACAGAAGTTCATGAATGCCAAACGCCTTGCAACTTATCAGGATTATCAGTCTTCTAAGGAATTCCATGAGACACTTGAGGTTTTGGACTCGAACAAGGATCTTCTGCTAAAATATCTTAAGCAGCCAGATTCTTTGTTTAAAAAGCATTTGAATGATCTACAAGGTTCCCCTTTTCAATCACATTCCGGTCATGTAGCACCACCCAATATGGAGAACTTTGACCATGGTTTAAATTGGAGATCAGATAAGGAGGCACAACATGTGAATTACAATAGGTTTCATCAGAAGCACTCTGATGATTATCACAACCAATTTGACAAAAGGCGTGTGATGCAGAATCCACCAAGATCATCAAAGCACCGGTTTAAGGGTAGCCGTGAACAATCTGCAGTCGCGACAAAGATTGTTGTCCTAAAGCCGAATCTTGGAAAATTACAGAATGGTACCAAAATTCAATCATCACCTTGTTCTCCGCATAACTTTCTGTCAGAACATGGAAATCAGGTTGAATTTTCAGATGTCAGATTTAGAGATGCTGAACTGTATAAAAAAATTAATTTGCCTGACAGTGCCAGGTCTTTTAGGCACAATTCTTTAGAATCTACAGAAATTGCAAAAGAAGTAACTAGGCAAATGAAAAACAGTCTGAGCAGAGGTTGTATGATGTCTTCCTCTTCTAGATTTAAAGGATGTACTAGAAGCGATAGTTCAAGCAGTGCTTCTGGGAACGAATCTCCAGAGGAAATAACAGCGCCTATCGGTGACCCATTTGACTTAAGTAAACGTAGCAGGCGCTCACCGCGTTCTACTGAATCATCTGTGAGTAGAGAGGCAAAGAAGAGATTATCAGAGAGGTGGAAGATGGCACACAAATCCCAAGAGGTGCAAGGCTCGAGCAGGAGCAGCACACTGGCTGATATGCTAGCATTCCCTGGTAAAAAGGGTACACGATTTGACAGCATGGCAAATGGGGGAGGTTTCTATGATAAGTTTGCTCGTAATGGTGAACCTTCTGGGTGGGTTGAACCACTGGGTATCAGCAGCAAGGATGGTTGGAGGGATGCATCTATTGGAAGTTTGTCGAGGTCAAAATCTCTTCCTGCATCATCTACTGTTTTTGGAAATGCTAGAACATTTATGTGTGCTGAAGCCCTTCGTAATGATCGATATATGGGGCCAAAGGACCTTAAACGGGAGAGGAGAAGAGCTACAATGAGTCTTGATCATAGACATGGTTTGAATTCTAGAAGCACTATATCTGGTCACAAGAAGTCTTGGTCTTTGCTTTCATCGAAGCAGGAAGTTAATGAGTTCTCTCCAGACTTAAATGCAGTTGAAAATAACATAATGATCAATCTTGAAGAAGATTCACCCAATCTAGAGGTTCATTCTCCTGAAACCTTTGGCCAACGCCTTAGAAATACAAGTGTTGTTAGCGATGATGTCGTGGATGTAGCAAATGGAAACACAGATGGGTCTTTTGAACCTTCTTCGGATAAAGTGCTTCCTGGAACATCATCCTGTGTCTTAATAAAAGGAGACAGTAGTGGTGTTGAAGACAATTCAATGCAAGAGGAAGTATCAGCTGGTTCTACAGGTGGAATTTCAGTCCTCTCTGAAGCACCTGCACCTGGACTTGAATCGCCATGCTGTAAAGATGCTGATCAGCCCAGTCCAATCTCAGTTCTAGATCCTTCTTTTACAGATGATGTGTCATCTTGTTCTGAATGTTTTGGGAGTGTCAGTGCTGACCTACAAGGGCTTAGAATGCAACTCCAGTTGCTGAAGTTAGAATCTGAAGAACATGTGGAGGGACCTATGCAAATTTCAAGTGATGAAGATGGTGTGGAAGCATATGCTGAAATGTTAGAAGAAAATGCATTACGGAGAACTGAAGATAGCTGGGAGTCTTCTTACATTATTGATGTCTTGTCTGAATCTGCCATCGATAAGGGTCAAACTCATAATATTTTGGAAGTTTGGCATTCTCTAGAATGCCCTGTTAGTCTGTCTGTATTTGAAAAACTTGAAGAAGAGAGGTACAGTGATTGGACTATTTGTTCAAAGTCTGAAAGGAGAATGCTTTTCGACCGCATCAATTCAGGAATTGTCAAAATTCACGAGCAATCTGCTGACCCACAACCATGGGTGGGTAATGCAGGCAAAACTTTTGGATCAAAAAGGTTTACTGGGCTCCAAGATGGTATTTTCCAGATGCTAGGGAGCCAAGGAAAGGTAGAGGATGATGCCCTGGGTAAGTTGCTGGTTGTGGAGTCTCAATGGTTGGGTTTGAGAGATGACATTGATGTAATAGGAAGAGAAGTTGAGATATTGATATTAGATGATTTAGTGGCAGAAATAGTTGGTATCTAA 2874 0.4182 MDKIKIKSHRTNSKLHLPQGKDQIHKQRHHQDLSPDSSSSSGGVGDKDSFSFKFGWKSSKQSVGTPIKKLLAEEMSPMTETKRRPPGVIARLMGLDGLPSQHLHKPVPLEKTQSRGLSNEGRSSRRSSRDQEEFKDVFEVSEIPKVESGRHSSSDFKAHEDEMSFIEQKFMNAKRLATYQDYQSSKEFHETLEVLDSNKDLLLKYLKQPDSLFKKHLNDLQGSPFQSHSGHVAPPNMENFDHGLNWRSDKEAQHVNYNRFHQKHSDDYHNQFDKRRVMQNPPRSSKHRFKGSREQSAVATKIVVLKPNLGKLQNGTKIQSSPCSPHNFLSEHGNQVEFSDVRFRDAELYKKINLPDSARSFRHNSLESTEIAKEVTRQMKNSLSRGCMMSSSSRFKGCTRSDSSSSASGNESPEEITAPIGDPFDLSKRSRRSPRSTESSVSREAKKRLSERWKMAHKSQEVQGSSRSSTLADMLAFPGKKGTRFDSMANGGGFYDKFARNGEPSGWVEPLGISSKDGWRDASIGSLSRSKSLPASSTVFGNARTFMCAEALRNDRYMGPKDLKRERRRATMSLDHRHGLNSRSTISGHKKSWSLLSSKQEVNEFSPDLNAVENNIMINLEEDSPNLEVHSPETFGQRLRNTSVVSDDVVDVANGNTDGSFEPSSDKVLPGTSSCVLIKGDSSGVEDNSMQEEVSAGSTGGISVLSEAPAPGLESPCCKDADQPSPISVLDPSFTDDVSSCSECFGSVSADLQGLRMQLQLLKLESEEHVEGPMQISSDEDGVEAYAEMLEENALRRTEDSWESSYIIDVLSESAIDKGQTHNILEVWHSLECPVSLSVFEKLEEERYSDWTICSKSERRMLFDRINSGIVKIHEQSADPQPWVGNAGKTFGSKRFTGLQDGIFQMLGSQGKVEDDALGKLLVVESQWLGLRDDIDVIGREVEILILDDLVAEIVGI 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06790 957 MobiDBLite consensus disorder prediction 122 141 - -
Vivi1g06790 957 Pfam Domain of unknown function (DUF4378) 804 953 IPR025486 -
Vivi1g06790 957 Pfam Protein of unknown function (DUF3741) 167 211 IPR022212 -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 382 469 - -
Vivi1g06790 957 Pfam DUF761-associated sequence motif 81 102 IPR032795 -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 1 45 - -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 58 141 - -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 15 33 - -
Vivi1g06790 957 PANTHER AFADIN 28 955 - -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 425 458 - -
Vivi1g06790 957 MobiDBLite consensus disorder prediction 382 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06790 Vivi-Chr1 160325640 160331537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06790 63 955 TRM (TON1 Recruiting Motif) Superfamily AT3G53540 35.729 1.19e-120 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06790 - - ccaj:109788117 1117.45