Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06784 ATGTCACTTGGTCTTTGCATACTCACTCTCTTTTATGCTAGTTGGCCCGTTATCGACCAAAATTTATTCATTTTGAGATTACATCATACGACCGCCACATATGCCGCTGCAATGTCTAATATCATTCCTGCGCTTACCTTTGTACTAGCTTTCTTTTTAAGGTTGGAGACGATAAACGTTGGAAATAGACGGTGTCAAGCCAAGTTGTTAGGCGCATTAGTCACGATCTTAGGAGCTATGGTGATGACCCTAATTAAAGGCCCGGTGTTATTTGGTGTCAGTGGAGGAAACAACAACAATAATCATGATGGAGTATCACATGTTTTATTTGGATCCATATTCATTTTTGCAAGATGTCTGGGTTGTGCCATCTTTGTGAATCTACAAGCTATTACATTAAAGTCTTATCCAGCAACACTCTCCTTGACCTCATTGGTATGCTTGATGGGTGCCCTGGAAGGTCTAGAAATGGCTTTTATCATGGAGGAAACACACTTTAATGCTGCTTGGTTGGTTTTCAAGTGGGACATGAATTTGTTGTCGGCTATTTATGCGGGAATAGTTTGCTCAGGCATTGGATATTTTCTTGAGGGAGTGATTATGAAAGAGAAAGGACCCGTTTTTCTTACCACCTTCAATCCATTATGCATGGTAATAGTTGCTGTGGTGAGTTTCTTCTTATTTGGGGAGAAAATCCTACTTGGAAGGGCAATTGGAGCATTTATATTATGTCTGGGATTATTCAGTGTAGTTTGGGGTAAGAGTGGCGATATCAATAACTCGTCACGTGCAAAGGATGAAATGAATTCTGAAGAGTTGAAAGAGGCACATTGTGAAAATTCAGGAGACGAGTTGAGAGAGACACGCCGTGAAAATTCAGGAGACGGGTTGAGAGAGACACGCCGTGAAAGTTCAGGAGACGAAATTACAGTTGAGTTGGTCGAGGCTGAGGGACGGAGCTATTCACAACAAAGTGTTATGGTGTATGATGATGTGTGGAGGCTGTCAGTGATGATTTATGGTGTTGAGAGGTTTGTGTGGTATGCACATAGAGTATTCTGGGCAGAGTTTTGTGAGGCTGAGATGTTGAGGGTTTGTTTTGGTTTAACCATTTTTGTGCAAGCTTTGGCCTTAGCAAGTAGTGGAGCAGCAAGAGGTTTTGGTTTAACCATTTTTGTGCAAGCTTTGGCCTTAGCAAGTAGTGGAGCAGCAAGAGGTTTGTAG 1224 0.4191 MSLGLCILTLFYASWPVIDQNLFILRLHHTTATYAAAMSNIIPALTFVLAFFLRLETINVGNRRCQAKLLGALVTILGAMVMTLIKGPVLFGVSGGNNNNNHDGVSHVLFGSIFIFARCLGCAIFVNLQAITLKSYPATLSLTSLVCLMGALEGLEMAFIMEETHFNAAWLVFKWDMNLLSAIYAGIVCSGIGYFLEGVIMKEKGPVFLTTFNPLCMVIVAVVSFFLFGEKILLGRAIGAFILCLGLFSVVWGKSGDINNSSRAKDEMNSEELKEAHCENSGDELRETRRENSGDGLRETRRESSGDEITVELVEAEGRSYSQQSVMVYDDVWRLSVMIYGVERFVWYAHRVFWAEFCEAEMLRVCFGLTIFVQALALASSGAARGFGLTIFVQALALASSGAARGL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06784 407 PANTHER WAT1-RELATED PROTEIN 15 258 IPR030184 GO:0016020|GO:0022857
Vivi1g06784 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 169 254 - -
Vivi1g06784 407 MobiDBLite consensus disorder prediction 279 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06784 Vivi-Chr1 160058024 160085247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06784 16 304 Nodulin-like Gene Family AT2G37460 43.836 4.86e-78 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06784 - - vvo:131658356 778.859