Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06776 ATGGAGAACCAAAAAACAGAAACTTGGATTGAAAAAGCAAAACCATTCATAGCTGTTTTGTCATTGCAATTAGGATATGCAGTTATGGATGTTTTATCAAAAGCTGCATTGAATAAAGGAATGAGCAACTATGTTTTTGTTGTCTATCGTCATGCTGTTGCATTTATTGTCATTACCCCTTTTGCACTCTATTTTGAAAAGAAAGTGAGACCGAAAATGACAATTTCAATCTTCATCAAGATAATGGCGCTCAGCTTGCTAGAGCCAGTTATTGATCAAAATTTGTATTTTTTGGGAATGAAATACACAACAGCAACTTTTGCAGCTGCCATGAGCAATATGCTTCCTGCTATTACTTTTATATTGGCTACCATTCTTAGGCTTGAGAAGATAAAGATAAAATGTATACGAAGTCAGGCAAAGATTTTGGGTACCATAGCAACTGTTGCGGGTGCCATGACAATGACATTAGTTAAAGGCCCAATACTTTTAGAGGCATTCGGAAGCAATAGCCACACTCATCAAACTGTTGCTATAACTAGTCAACATACAATAGCTGGAGGAGTGCTGATCACAATAGGATGCATTTGTTGGGCTTGTTTTTTTAATCTACAAGCTATTACTCTTCAAACATACCCTGCAACGCTTTCTCTTTCGTCGTGGATATGTCTAATGGGCACGGTTGAAGGTGCGGCGGTGGCTTCTGTTATGGAATGGGGTCATCCTTCAGTTTGGTCCATAAAATGGGATATGAGATTGTTCTCGACTGTTTACACAGGCATATTCTGCTCGGGTCTCGCATATTACTTGCAGGGAGTCGTGATGAAAACTAAAGGTCCAGTTTTCGTCACAACATTTAGTCCTTTCTGTATGGTGATCGTTGCTATCTTGGGATACTTTCTTCTCGCAGAACAAATGTTTCTCGGAAGGGTGATAGGTGCATTTATCATTTGTTTGGGCTTATACCTTGTTATATGGGGAAAAAACAAAGATTATGATACCTCCTCAAGTCAAATTATTGAAGAGCCTGTTGAATCACCTAAGCAAGCTGGAAGTGAAAATTGTACTCATGAAGTCATCATTATTCACTAA 1092 0.3855 MENQKTETWIEKAKPFIAVLSLQLGYAVMDVLSKAALNKGMSNYVFVVYRHAVAFIVITPFALYFEKKVRPKMTISIFIKIMALSLLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFILATILRLEKIKIKCIRSQAKILGTIATVAGAMTMTLVKGPILLEAFGSNSHTHQTVAITSQHTIAGGVLITIGCICWACFFNLQAITLQTYPATLSLSSWICLMGTVEGAAVASVMEWGHPSVWSIKWDMRLFSTVYTGIFCSGLAYYLQGVVMKTKGPVFVTTFSPFCMVIVAILGYFLLAEQMFLGRVIGAFIICLGLYLVIWGKNKDYDTSSSQIIEEPVESPKQAGSENCTHEVIIIH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06776 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Vivi1g06776 363 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020
Vivi1g06776 363 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Vivi1g06776 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 330 - -
Vivi1g06776 363 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06776 Vivi-Chr1 159732549 159735039 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06776 1 362 Nodulin-like Gene Family AT2G37460 62.022 7.00e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06776 - - gmx:100811147 503.056