Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06775 ATGGAGAACCAAAAGACAGAAACTTGGATTGAAAAGGCAAAACCATTCATAGCTGTTTTGTCATTGCAATTAGGATATGCAGTTATGGATGTTTTATCAAAAGCTGCATTGAATAAAGGAATGAGCAACTATGTTTTTGTTGTCTATCGTCATGCTGTTGCATTTATTGTCATTACCCCTTTTGCACTCTATTTTGAAAAGAAAGTGAGGCCGAGAATGACAATTTCAATCTTGTTTAAGATAATGGTGCTCAGCTTGCTAGAGCCAGTTATTGATCAAAACTTGTATTTTTTGGGAATGAAATACACAACAGCAACCTTTGCAGCTGCCATGAGCAATATGCTTCCTGCTATTACTTTTATATTGGCTACCATTCTTAGGCTCGAAAAGATAAAGATAAAATGTATAAGAAGTCAGGCAAAGGTGTTAGGCACGATAGCAACCGTCGCTGGTGCCATGACGATGACATTAGTTAAAGGCCCAATACTTTTAGACGCATTTGGAAGCAATAGCCACAACCATCCTAGTGTTGCTATAACTAGTCAACATACAATAGCTGGAGGAGTGTTGATCACAATAGGATGCATTAGTTGGGCTTGTTTTTTTAACCTTCAAGCTATTACCCTTCAAACATACCCTGCAACACTTTCTCTTTCGTCGTGGATATGTCTAATGGGCACGATTGAAGGTGCGGCGGTGGCTTCTGTTATGGAATGGGGTCATCCTTCAGTTTGGTCCATAAAATGGGATATGAGGTTGTTGTCGACTATTTACACAGGCATATTCTGCTCAGGGTTAGGTTATTACCTGCAAGGAGTCGTGATGAAAACAAGAGGTCCGGTTTTCGTCACAGCATTTAGTCCTTTGAATATGGTGATTGTTGCTATTTTGGGATACTTTCTTCTCGCGGAACAAATGTTTTTGGGAAGGGTGATAGGTGCATTTATCATTTGTTTGGGCCTATACCTTGTTATATGGGGAAAAAACAAAGATTATGATGCCTCCTCAAATCAAATTATTGAAGAGCATGTTGAATCAGCTAAGCAAACTGCTGGTGAAAATTGCACTCATGAGGTCATCATTATTCACTAA 1092 0.391 MENQKTETWIEKAKPFIAVLSLQLGYAVMDVLSKAALNKGMSNYVFVVYRHAVAFIVITPFALYFEKKVRPRMTISILFKIMVLSLLEPVIDQNLYFLGMKYTTATFAAAMSNMLPAITFILATILRLEKIKIKCIRSQAKVLGTIATVAGAMTMTLVKGPILLDAFGSNSHNHPSVAITSQHTIAGGVLITIGCISWACFFNLQAITLQTYPATLSLSSWICLMGTIEGAAVASVMEWGHPSVWSIKWDMRLLSTIYTGIFCSGLGYYLQGVVMKTRGPVFVTAFSPLNMVIVAILGYFLLAEQMFLGRVIGAFIICLGLYLVIWGKNKDYDASSNQIIEEHVESAKQTAGENCTHEVIIIH 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06775 363 PANTHER WAT1-RELATED PROTEIN 14 332 IPR030184 GO:0016020|GO:0022857
Vivi1g06775 363 Pfam EamA-like transporter family 17 153 IPR000620 GO:0016020
Vivi1g06775 363 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Vivi1g06775 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 330 - -
Vivi1g06775 363 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06775 Vivi-Chr1 159587434 159589849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06775 1 362 Nodulin-like Gene Family AT2G37460 63.957 6.85e-167 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06775 - - gmx:100811147 507.679