Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06759 ATGGCAGACTCGAGTTCCAATGCCACCAACGCAGGCTCTCATTTCCTACCAACGGTTACATTATTCGACTGGTGGCTCGTTAAATCCCCAGACAACCGTTTATGCATCTCCGGCAACGCTTCCAGAAAGGGAGAAGCCGTTCGCGTGTTCAATTCTTCTCCTATTGTTGAAAGATACGATGTGTATTCCCTTAAGAATGCCGAGGGTATATACATTTTCATTAGGGGTATCATCAATGAGGAACGCACGCTCGAAAAAGGTTTTACTCCTCAGATTTTCAATAGTTTTTACATTGGCTTTCCTCCAAACTGGGAAACTTGTTGGGTTTTACATTGTATCAGAGAAGAAGAAGAAGAAGTAGAAACTGGTACTGATTTGGTCAATGCTGCTATGAATACTGAATCTCCAATTTGTGAAGACATTTTGTCTGACGATGAGCAAAAATCCATTTCTGTTTTGTTGGAATTGCCTGAAGAAGCCCCAGAAAATAACCAGACACCATTCCCTGGAGATGAATGCCAAGTCTCAAAGGAGACGAGTGGGGTAAATGTTGCTTGTGGTGGTGGTGTAATTAAACGTAGTACCAGGTTACATAGTATTAACGTCTGTCAGCAGAAGAAGATAGAGAAGCAGCAGCCTACGTCTAGAGGTCCTCTCAAGCATCCAGATGGAGAGCCAAGCTCTACCTCCAAGGCAGTGGAAAATCGTGATTCGGATACTGCGCATCTTGATAATGTATCAGCAAATCTTCCAGAAATATCATCTGGTGCTGTGGAAAATTCTTTTCCTACTTCATCGGTAACACCTGAAAAGGCCACGGGACATTGCAATAAGTTATTCCCTGAAGGTGAAGAAGATATGTCAATTAAGACGAGTGAGGCCAATGTTGTTCATGGTAGTGGCAGGAATAGACGTAGTGCCCGGTTGCATAATGTTAAATCCTTCCAAAAGAAGCAGCCTGCTACTGGAGGTCCGGCAACACGTCGAGGTAAAAACCGGATCTCCGCCTCAGCAGCCATAGAAAAGAGTGATGGGGGGCTGGAAAATCTATCGACATCCGTTCAGTCACAAAGTGGAATAGTAAACACGTTGTCTGGGCAGGTCTCTAATAAAATAATATCCAAAACTTCTTCAGCAAAAACTGAAGTGGGTCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAAAGAGTGATGGGGGGCTGGAAAATCTATCGACACCAGTTCAGTCTCAAAGTGGAATAGTAAACACACTGTCTGGGCAGGTCACTAATAAATTCAGATCCAAAATTTCCAAAACTTCAGCAAAAACTGAAGTGGGTCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAAAGAGTGATGGGGGGCTGGAAAATCTATCGACACCCGTTCAGTCACAAAGTGGAATAGTAAACACGCTGTCTGGGAAGGTCACTAATAAATTCAGATCCAAAATTTCCAAAACTTCTTCAGCAAACACTGAAGTGGGTCATAAGAAAAAGAAGGTGACAGTTGAAACAGAAGCCGTGAATCACAAGAGAAAAGTTATGAAACCCCCATCTTCTGTAAAATCTCCACAGGGAAGGGATGTAACTCACTTGAACAAGGGAAGTAAACAGGAATTAACCATGGTTTCCCCGGAGTCATTGAGTCTTAAAAAATCCAGATCTGGTAGGTTACTTCTACCTTCCATGGAGTTTTGGCGCAACGAAATACCCATTTATAATGCGGACCGTGGGATTAAAGAAATTCAGCAAGACTTGACTTTGACATCACCTTTTAGAGGCTTTTCGCCATCACCTTTTAGAGGCTTTTCGCCGTCACCGGGCAGGTTTTGA 1839 0.4285 MADSSSNATNAGSHFLPTVTLFDWWLVKSPDNRLCISGNASRKGEAVRVFNSSPIVERYDVYSLKNAEGIYIFIRGIINEERTLEKGFTPQIFNSFYIGFPPNWETCWVLHCIREEEEEVETGTDLVNAAMNTESPICEDILSDDEQKSISVLLELPEEAPENNQTPFPGDECQVSKETSGVNVACGGGVIKRSTRLHSINVCQQKKIEKQQPTSRGPLKHPDGEPSSTSKAVENRDSDTAHLDNVSANLPEISSGAVENSFPTSSVTPEKATGHCNKLFPEGEEDMSIKTSEANVVHGSGRNRRSARLHNVKSFQKKQPATGGPATRRGKNRISASAAIEKSDGGLENLSTSVQSQSGIVNTLSGQVSNKIISKTSSAKTEVGHKKKKVTVETEKSDGGLENLSTPVQSQSGIVNTLSGQVTNKFRSKISKTSAKTEVGHKKKKVTVETEKSDGGLENLSTPVQSQSGIVNTLSGKVTNKFRSKISKTSSANTEVGHKKKKVTVETEAVNHKRKVMKPPSSVKSPQGRDVTHLNKGSKQELTMVSPESLSLKKSRSGRLLLPSMEFWRNEIPIYNADRGIKEIQQDLTLTSPFRGFSPSPFRGFSPSPGRF 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06759 612 Pfam SANTA (SANT Associated) 19 106 IPR015216 -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 251 274 - -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 203 237 - -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 297 334 - -
Vivi1g06759 612 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 6 586 - -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 251 272 - -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 509 534 - -
Vivi1g06759 612 MobiDBLite consensus disorder prediction 441 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06759 Vivi-Chr1 158747149 158751717 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g06759 SANTA 2.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06759 - - vvo:131644527 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06759 1 158747149 158751717 Vivi1g06759 1 158747149 158751717 ECH