Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06739 ATGTCAAAAGAAAAAAACTCCAAGCACAATCCATCAAATCTAGTAGCCAAATTAATGGGGCTTGAGACCCTTCCAAAGGGAGAGTCTAATTTATCAAAAGATTATTCTCCAGACATTTATGGTCATCTAGGGTGGCCATTGAAACATAGGAAGGTGGAAGATAGGTTTATGATGTGTAATAAGGAAATGCTTCATGGAGCTCATCATTCAAGCACAGAACAGGTTGGTTACATAGATGGATATGAAACATGGCTGGATTCTCATAGAGGAAGGTGGAGGGAAGATTTTGATGAGGGGAAAATGGCTCTTGTTCGTCAGAAATTCATCGAGGCAAAGAGTATGTCGACACACGAGGCTCTGCGGCAGTCGAAGCAATTTCAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTGGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCGTCTACTCCACCCGACGATGCAAATCGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTCTGGAAAGAGTAAGAAGAATGATAGATTGATTAGAAAACCAGCAAATTCTGATCAAACAACTGTGAGGGAGAATATTAATCGTGGATACTCTCCGGAGTCTACTCGAATAGTGGTATTGAAGCCTAGTCCTGGAAGGACTCATGATCTTAAGTCTATGGTTTCTCCGAGAACTCAATCACCTCAAAGTTTCTATCAGGGAAATAGCAATGATGATGTACTTGAATCCATAAGAGATTGTAAAGAGATTACATTGCAAATGCATCCTAATGATAAAACTTTACATTCTTCAGTATTTTCCAGTGGCTATTCAAGTGATGAGAGCTTATTTGACAAATCTTATCATGATTTGGAAGCTGTGTCACCAATGCCAAGGCATTCATGGGATTGCATCATCAATGTATGTGGAAGTCCTTATTCTACACAATCCTTGGGTCGTGCAACGTGTTCTCCCGAATCATCGGTCTGCATAGAGGCAAAGAAACGGCTTTCCGAAAGATGGAACGTGATAACATCTGTTGAAAAAGGTCATCAAGAACAAAGCTGCGTGACAGGAAACTCTACTCTCGGTGAAATGCTTTCTCTTTCCCTCGTAAAAAAATCGGTAACATCTGAGGTTGAAAGTCCTAATAAACACCAAGAAGAACCAAGCAAATCTGTTTCTTGCAGTCAATCTTTCAATGAAGAAGGGAGCATGAATGATTCTCCTCAAAATGTTTCTCTGTTAAGTTCTGTTCCTGCTTCTTCTACTGTCTATGAACCCGGCCTTGGCGTTGACGCTGACAAAGAACACGGCTCCAAGGTGGTGGCAAAGTCAAAGAGAAAGAGATCATCATTTAAAGGGAAGGTTGCAAGTTTCTTGTTTTCTATGAGTAAAAAATCAACCAAGAAAAAATCTAGCCCATCTCAATCAAAAGACGAATCTGAATCGGCTGTCACCGAAACATCGATACCGCAAGTAAATTCGCCTGGAGTCCTTGGAGATAATGTGTCTCAAAGCTTTAATGTTGGTGAATTTGAAGAATCTATTGCAGCTAAATGTGAATCATTAGGCAAAACTTCAACAGATTCAGTCTCTAGTGGACAACAAGAAGACATGATTACACTAGAGCCTGGATCAAGTGAGTCAAAGCTTGTGGTGCTAGAGGTTTCAACTGAGAAACAGGATCAGCCTAGTCCAATCTCAGTGTTAGAATCTACATTTGAAGATTACCATACAGCTCATGATTCCTTGCAATGCATGAAAAGTGGTCACATGGAATCGCTGGAGCCTCTGAAGTCGAATTTAATTGACAAATCACCACCTATAGAATCAGTAGCTAGGACCCTGTCATGGGATGATGATTCTTGTGGAGAGTTAACAAGTCCTTATTATCCATTAAAACCTTTAAGGACTTCTTCCTTAGAGACCAAGTTAGAGGAACATGAATGGCTTCTTTTAGTCCAAAAACTACTATCAGCATCTGGACTTGATGATGATGATGATGATCAAGAACAACAGTATGACTCATTCCACACAAGATTTCACTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAACATAACTGACAACAAGGACAATACTCAGCCTCTTAATGAGGCTAAGAGAAGGAAAATGAGGTCAAATCAGAAACTTATATTTGATTGTGTTAATGCTGCACTACTGGAAGTTGTTAGTTGTGATGATGGGTCAGGGAATTACTTCAAGATGTACAGTGGGACCAACAGAAGGCCCTTCAACTTCCAAGAGGGTTATTGTTTGATGGACCACATTGTGGCCTATATGAAGGATTTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCATGTTGGGTTGGTTAAGGTTATGAGAAAAGAGATTGAGGCTTTGGGGAGGGAAATAGAAGAAAATCTTATCGAAGAACTCGTGGAGAATGTTGTGCTTGATATTACAAGCAGATGA 2538 0.4019 MSKEKNSKHNPSNLVAKLMGLETLPKGESNLSKDYSPDIYGHLGWPLKHRKVEDRFMMCNKEMLHGAHHSSTEQVGYIDGYETWLDSHRGRWREDFDEGKMALVRQKFIEAKSMSTHEALRQSKQFQDALDILSSNNDLLVRFLDSQKLYQLPSTPPDDANRITLIKPLKMFGNDKSSGKSKKNDRLIRKPANSDQTTVRENINRGYSPESTRIVVLKPSPGRTHDLKSMVSPRTQSPQSFYQGNSNDDVLESIRDCKEITLQMHPNDKTLHSSVFSSGYSSDESLFDKSYHDLEAVSPMPRHSWDCIINVCGSPYSTQSLGRATCSPESSVCIEAKKRLSERWNVITSVEKGHQEQSCVTGNSTLGEMLSLSLVKKSVTSEVESPNKHQEEPSKSVSCSQSFNEEGSMNDSPQNVSLLSSVPASSTVYEPGLGVDADKEHGSKVVAKSKRKRSSFKGKVASFLFSMSKKSTKKKSSPSQSKDESESAVTETSIPQVNSPGVLGDNVSQSFNVGEFEESIAAKCESLGKTSTDSVSSGQQEDMITLEPGSSESKLVVLEVSTEKQDQPSPISVLESTFEDYHTAHDSLQCMKSGHMESLEPLKSNLIDKSPPIESVARTLSWDDDSCGELTSPYYPLKPLRTSSLETKLEEHEWLLLVQKLLSASGLDDDDDDQEQQYDSFHTRFHSLESPLDPSLRDTYANITDNKDNTQPLNEAKRRKMRSNQKLIFDCVNAALLEVVSCDDGSGNYFKMYSGTNRRPFNFQEGYCLMDHIVAYMKDLIANGMRFVWGGDSHSLVVENVVRKEVVHVGLVKVMRKEIEALGREIEENLIEELVENVVLDITSR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06739 845 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 844 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 219 246 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 381 418 - -
Vivi1g06739 845 Pfam Domain of unknown function (DUF4378) 658 836 IPR025486 -
Vivi1g06739 845 Coils Coil 812 832 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 392 418 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 482 505 - -
Vivi1g06739 845 Pfam Protein of unknown function (DUF3741) 105 146 IPR022212 -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 176 190 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 431 451 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 229 246 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 471 505 - -
Vivi1g06739 845 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06739 Vivi-Chr1 157929254 157933585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06739 1 843 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.663 2.42e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06739 - - vvo:131644516 1586.62