Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06728 ATGTCAAAAGAAAAAAACTCCAAGCACAATCCATCAAATCTAGTAGCCAAATTAATGGGGCTTGAGACCCTTCCAAAGGGAGAGTCTAATTTATCAAAAGATTATTCTCCAGACATTTATGGTCATCTAGGGTGGCCATTGAAACATAGGAAGGTGGAAGATAGGTTTATGATGTGTAATAAGGAAATGCTTCATGGAGTTCATCATTCAAGCACAGAACAGGTTGATTACATAGATGGATATGAAACATGGCTGGATTCTCATAGAGGAAGGTGGAGGGATGATTTTGATGAGGGGAAAATGGCTCTTGTTCGTCAGAAATTCATCGAGGCAAAGAGTATGTCGACACACGAGGCTCTGCGGCAGTCGAAGCAATTTCAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTGGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCGTCTACTCCACCAGACGAAGCAAATCGCATTACCCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAATCTTCTGGAAAGAGTAAGAAGAATGATAGATTGATTAGAAAACCAGCAAATTCTGATCAAACAACTGTGAGGGAGAATATTAATCGTGGATACTCTCCGGAGTCTACTCGAATAGTGGTATTGAAGCCTAGTCCTGGAAGGACTCATGATCTTAAGTCTATGGTTTCTCCGAGAACTCAATCACCTCAAAGTTTCTATCAGGGAAATAGCAATGATGATGTACTTGAATCCATAAGAGATTGTAAAGAGATTACATTGCAAATGCATCCTAATGATAAAACTTTACATTCTTCAGTATTTTCCAGTGGCTATTCAAGTGATGAGAGCTTATTTGACAAATCTTATCATGATTTGGAAGCTGTGTCACCAATGCCAAGGCATTCATGGGATTGCATCATCAATGTATGTGGAAGTCCTTATTCTACACAATCCTTGGGTCGTGCAACGTGTTCTCCCGAATCATCGGTCTGCATAGAGGCAAAGAAACGGCTTTCCGAAAGATGGAACGTGATAACATCTGTTGAAAAAGGTCATCAAGAACAAAGCTGCGTGACAGGAAACTCTACTCTCGGTGAAATGCTTTCTCTTTCCCTCGTAAAAAAATCGGTAACATCTGAGGTTGAAAGTCCTAATAAACACCAAGAAGAACCAAGCAAATCTGTTTCTTGCAGTCAATCTTTCAATGAAGAAGGGAGCATGAATGATTCTCCTCAAAATGTTTCTCTGTTAAGTTCTGTTCCTGCTTCTTCTACTGTCTATGAACCCGGCCTTGGCGTTGACGCTGACAAAGAACACGGCTCCAAGGTGGTGGCAAAGTCAAAGAGAAAGAGATCATCATTTAAAGGGAAGGTTGCAAGTTTCTTGTTTTCTATGAGTAAAAAATCAACCAAGAAAAAATCTAGCCCATCTCAATCAAAAGACGAATCTGAATCGGCTGTCACCGAAACATCGATACCGCAAGTAAATTCGCCTGGAGTCCTTGGAGATAATGTGTCTCAAAGCTTTAATGTTGGTGAATTTGAAGAATCTATTGCAGCTAAATGTGAATCATTAGGCAAAACTTCAACAGATTCAGTCTCTAGTGGACAACAAGAAGACATGATTACACTAGAGCCTGGATCAAGTGAGTCAAAGCTTGTGGTGCTAGAGGTTTCAACTGAGAAACAGGATCAGCCTAGTCCAATCTCAGTGTTAGAATCTACATTTGAAGATTACCATACAGCTCATGATTCCTTGCAATGCATGAAAAGTGGTCACATGGAATCGCTGGAACCTCTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAGTAGCTAGGACCCTATCATGGGATGATGATTCTTGTGGAGAGTTAACAAGTCCTTATTATCCATTAAAACCTTTAAGGACTTCTTCCTTAGAGACCAAGTTAGAGGAACATGAATGGCTTCTTTTAGTCCAAAAACTACTATCAGCATCTGGACTTGATGATGATGATGATGATCAAGAACAACAGTATGACTCATTCCACACAAGATTTCACTCCCTTGAAAGCCCATTGGACCCATCATTGAGGGACACATATGCCAACATAAATGACAACAAGGACAATACTCAGCCTCTTAATGAGGCTAAGAGAAGGAAAATGAGGTCAAATCAGAAACTTATATTTGATTGTGTTAATGCTGCACTACTGGAAGTTGTTAGTTGTGATGATGGGTCAGGGAATTACTTCAAGATGTACAGTGGGACCAACAGAAGGCCCTTCAACTTCCAAGAGGGTTATTGTTTGATGGACCACATTGTGGCCTATATGAAGGATTTAATAGCAAATGGGATGAGGTTTGTTTGGGGTGGGGACAGTCACAGCCTGGTTGTAGAAAATGTTGTTAGGAAAGAGGTTGTGCATGTTGGGTTGGTTAAGGTTATGAGAAAAGAGATTGAGGCTTTGGGGAGGGAAATAGAAGAAAATATTATCGAAGAACTCATGGAGAATGTTGTGCTTGATATTACAAGCAGATGA 2538 0.3987 MSKEKNSKHNPSNLVAKLMGLETLPKGESNLSKDYSPDIYGHLGWPLKHRKVEDRFMMCNKEMLHGVHHSSTEQVDYIDGYETWLDSHRGRWRDDFDEGKMALVRQKFIEAKSMSTHEALRQSKQFQDALDILSSNNDLLVRFLDSQKLYQLPSTPPDEANRITLIKPLKMFGNDKSSGKSKKNDRLIRKPANSDQTTVRENINRGYSPESTRIVVLKPSPGRTHDLKSMVSPRTQSPQSFYQGNSNDDVLESIRDCKEITLQMHPNDKTLHSSVFSSGYSSDESLFDKSYHDLEAVSPMPRHSWDCIINVCGSPYSTQSLGRATCSPESSVCIEAKKRLSERWNVITSVEKGHQEQSCVTGNSTLGEMLSLSLVKKSVTSEVESPNKHQEEPSKSVSCSQSFNEEGSMNDSPQNVSLLSSVPASSTVYEPGLGVDADKEHGSKVVAKSKRKRSSFKGKVASFLFSMSKKSTKKKSSPSQSKDESESAVTETSIPQVNSPGVLGDNVSQSFNVGEFEESIAAKCESLGKTSTDSVSSGQQEDMITLEPGSSESKLVVLEVSTEKQDQPSPISVLESTFEDYHTAHDSLQCMKSGHMESLEPLKSNLIDKSPPIESVARTLSWDDDSCGELTSPYYPLKPLRTSSLETKLEEHEWLLLVQKLLSASGLDDDDDDQEQQYDSFHTRFHSLESPLDPSLRDTYANINDNKDNTQPLNEAKRRKMRSNQKLIFDCVNAALLEVVSCDDGSGNYFKMYSGTNRRPFNFQEGYCLMDHIVAYMKDLIANGMRFVWGGDSHSLVVENVVRKEVVHVGLVKVMRKEIEALGREIEENIIEELMENVVLDITSR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06728 845 Pfam Protein of unknown function (DUF3741) 105 146 IPR022212 -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 176 190 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 219 246 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 381 418 - -
Vivi1g06728 845 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 844 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 431 451 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 229 246 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 392 418 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 471 505 - -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 482 505 - -
Vivi1g06728 845 Pfam Domain of unknown function (DUF4378) 658 836 IPR025486 -
Vivi1g06728 845 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06728 Vivi-Chr1 157578275 157582717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06728 1 843 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 33.443 8.19e-107 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06728 - - vvo:131644516 1598.18