Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06710 ATGGCCACTGCTGCCAGTCCTGTTGTTGGTTCCCAGGTTTGGGTGGAGGACTTTGATGTAGCTTGGATGGATGGCGAGGTCTTGGAGGTTAAAGGAGAAGAAATAAAAGTCCTTTGCACTTCTGGAAAGAAGGTTGCTGTTAAAGCTTCAAGTGTTTATCATAAAGATACAGAAGCCCCACCTTGTGGAGTGGATGATATGACAAAGCTTGCTTACCTGCATGAACCTGGTGTTCTAGATAATCTGAGATCAAGATATGATATCAATGAAATTTATACTTACACTGGGAATATATTGATTGCTGTGAACCCTTTCATAAGGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGGCTTTGGTGAGCTAAGCCCACATCCTTTTGCTATTGCTGACTCGGCATATAGACTTATGATCAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGAGCTGGTAAAACTGAAAGCACAAAGTTACTTATGCGCTATCTTGCTTACATGGGAGGGAGAGCTATTGTTTCTGAAGGTAGAACTGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTCTAGAAGCCTTTGGAAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAATTTGTGGAGATTCAATTTGACAAGAAGGGAAGAATTTCTGGAGCTGCTATCAGAACTTACCTGTTGGAAAGATCTCGTGTTTGCCAGTTGTCGGATCCAGAGAGGAATTATCACTGTTTCTATATGCTTTGTGCTGCACCTCCAGAGGTTATTCAAAAGTATAAATTAGGAAATCCAAGAACATTTCATTATCTAAATCAAACAAATTGTTATGAGATAGAAGGGCTTGATGAGTCTAAAGAATATTTTGATACAAGAAGAGCAATGGATGTTGTTGGAATAAGTTCCGAGGAGCAGGAAGCAATATTTCGAGTGGTTGCTGCCATTTTACATCTTGGCAACATTGAATTTTCAAAAGGAGAGGAAATGGACTCATCTATGCCCAAAGATGAAAAATCTCAGTTTCATCTCCAAACCGCGGCTGAGCTTTTCATGTGTGATGCAAAGGCACTCGAAGATTCTCTTTGCAAGCGTGTAATTGTAACCCGTGATGAAAATATTGTAAAATGCCTGGATCCAGAAGCTGCTTCACTGAGCCGAGATGCTTTAGCTAAGACTGTGTACACAAGGTTGTTTGACTGGCTGGTAGATAAAATTAATAATTCAATTGGTCAAGATCCTGACTCAAAATCCTTAATAGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTCTGTATTAATTTGACAAATGAAAAGCTCCAGCAACATTTTAATCAGCATGTTTTTAAAATGGAGCAAGAAGAATACAAGAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTTTGGATCTCATTGAAAAGAAACCTGGAGGCATTATTGCTCTTCTTGATGAAGCTTGTATGTTTCCTAGATCAACAAATGAAACTTTTGCACAAAAGCTGTACCAGACGTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAATTGTCCCGCAGTGACTTCACAATTTGCCATTATGCTGGTGATGTCACTTATCAAACTGAGTTATTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCACTTTTGTATGCTTCCACATGTCCGTTTGTATCGGGTTTATTTCTCCCCTCACCCGAGGAATCGTCCAATAAATCAAAATTTTCTTCAATAGGTTCCCGGTTTAAGCAACAATTACAAGCTCTACTTGAAATTCTTAGTTCCACTGAGCCACACTACATTCGCTGTGTTAAACCCAATAATCTTCTCAAGCCAGCAATTTTTGAGCACAAAAATGTTTTGCAGCAACTGCGCTGTGGAGGTGTCATGGAGGCAATCAGGATAAGCTGCGCTGGCTTTCCCACCAGAAAAACATTTGATGAGTTCGTGGATCGATTCGGGCTTCTTGCACCTGAAGCTTTGGATCGTAGTTCTGATGAGGTCACTTCTTGCAAGAGGATTTTGGACAAGGTTGGACTTAAAGGATATCAGATTGGTAAAACCAAAGTGTTTCTTAGATCTGGTCAAATGGCCGAACTAGATACTCGTCGAAGTGAGATCTTAGGAAAGTCAGCAAACGTTATTCAGAGGAAAGTTCGTTCCTATTTGGCCCGCCGAAGTTTTGTCTTGATTCGCTTATCTGCTGTACAGATACAAGCTGCATGCAGAGGACAACTTGCTCGGAAAGTATACGAGGGATTGCGGCAGGAGGCTTCTAGTCTGATCATTCAGAGGTATTTCCGCATGCACATTGCTAGGAAGGAATACAAAGAATTTTACAGCTCGGCTATTTCTATTCAAACTGGTATGCGAGGGATGGCTGCTCGTTGTGAGCTGCGCTTTAGGAAGCAGACCACTGCAGCTATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAACACCATTATATGAACTTAAAGAAAGCGGCAATTGCCACCCAATGTGCATGGAGAGGAAAAGTCGCTCGGCGAGAACTACGAAATCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAACTTGAAAAGCAAGTGGAAGACCTTACTTTGAGGTTGACGTTGGAAAAACGCCGCAGGGTTGACATGGAAGAAGCAAAAAGACAAGAAAATGAAAAATTACAATCTGCTTTACACGAGATGCAACTTCAGTTTAAAGAAACGAAGTCATTGCTTCAAAAGGAGCGTGAGACTACAAAAAGAGAAGCAGAGAGAGTGTCTGTCATACAGGAGGTTCCTGTTGTTGACCATCCTTTGTTGGAGAAGCTAACTAGTGAAAATGAGAAACTCAAGACCTTGGTGAGTTCACTGGAAAAAAAAATTGACGAAACAGAGAAAAGGTATGAAGAGACCAATAAAATCAGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCTGAATCAAAAATAATCCAATTGAAAACTTCTATGCAAAGGCTTGAAGACATATTCTTAGATATGGAATCCGAAAACCAGGTTCTTCGGAAACAGTCTCTGCTTAACTCATCTGTGAAAACAATGTCAGAGCACCTTTCTACCCATGCATATGAGAAGTTGGAAAATGGTCACCATGTGGTAGAAGATCAGAAAGCTGCTGAAACACCAGTAGTCACACCTGTGAAACAATTCGGTACAGAATCTGATAGCAGATTAAGGAGATCCTACATTGAACGTCAACATGAAAATGTTGATTCCCTTGTAAATTGTGTTATGAAAAATATTGGATTCCAACATGGAAAGCCTGTTGCCGCTTTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGTACCAAGATGACAATGACCTTATGGCCTATTGGCTGTCAAATACGTCTGCACTATTGTTTCTGCTCCAACAAAGTTTAAAGTCAGGTGGTTCAACTGATGCAACCCCAGTAAGAAAACCACCAAATCCAACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGATCATCTCCTTCTTCTGCCAACCTTCCTGCCCCCTTGGAGGTTGTACGCAAAGTAGAGGCAAAGTATCCTGCTTTGCTTTTCAAGCAACAGCTCACTGCCTATGTGGAGAAAATATATGGTATCTTGCGGGACAACTTGAAGAAAGAGTTGACATCATTTACTTCATTATGTATCCAGGCCCCAAGAACATCGAAGGGAGTCTTAAGATCTGGTCGATCATTTAGTAAAGATTCTCCCATGGGTCATTGGCAGAGTATTATTGAATCCCTCAACACCTTTCTCTGTACTATGAAAGAGAACTTTGTGCCTCCTGTCCTAATCCAAAAGATCTTCTCTCAAACATTTTCATATATTAATGTTCAATTCTTCAATAGTCTTCTTCTGCGGCGTGATTGTTGCACATTCAGCAATGGAGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGCTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGAACATCTTGGGATGAGCTCAAGCACATAAGACAGGCGGTTGGATTCTTGGTTATTCATCAGAAATATAGGATTTCCTATGATGAAATCATCAACGATTTATGCCCTATCATGAGTGTCCAGCAGTTGTACAGAATATGTACACTTTATTGGGATGCTAACTACAACACTCGAAGCGTATCTTCAGATGTCCTTGCAAGCATGAAAGTACTTATGGCTGAGGATTCAAACAATGCTCAGAGTGATTCTTTCTTGTTGGACGACACTTCCAGCATCCCATTCTCAGTCGATGACCTCTCTACATCACTGCAAGAGAGAGATTTTTCTGAGATGAAACCAGCAGATGAGCTTCTTGAGAATCCCGCCTTCCAATTTTTGAACGAGTAG 4539 0.4074 MATAASPVVGSQVWVEDFDVAWMDGEVLEVKGEEIKVLCTSGKKVAVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIRLPHLYDSHMMAQYKGAGFGELSPHPFAIADSAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAIVSEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEVIQKYKLGNPRTFHYLNQTNCYEIEGLDESKEYFDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFSKGEEMDSSMPKDEKSQFHLQTAAELFMCDAKALEDSLCKRVIVTRDENIVKCLDPEAASLSRDALAKTVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTNETFAQKLYQTFKNHKRFSKPKLSRSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLYASTCPFVSGLFLPSPEESSNKSKFSSIGSRFKQQLQALLEILSSTEPHYIRCVKPNNLLKPAIFEHKNVLQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEALDRSSDEVTSCKRILDKVGLKGYQIGKTKVFLRSGQMAELDTRRSEILGKSANVIQRKVRSYLARRSFVLIRLSAVQIQAACRGQLARKVYEGLRQEASSLIIQRYFRMHIARKEYKEFYSSAISIQTGMRGMAARCELRFRKQTTAAIVIQSHCRKYLAQHHYMNLKKAAIATQCAWRGKVARRELRNLKMAARETGALQAAKNKLEKQVEDLTLRLTLEKRRRVDMEEAKRQENEKLQSALHEMQLQFKETKSLLQKERETTKREAERVSVIQEVPVVDHPLLEKLTSENEKLKTLVSSLEKKIDETEKRYEETNKISEERLKQALDAESKIIQLKTSMQRLEDIFLDMESENQVLRKQSLLNSSVKTMSEHLSTHAYEKLENGHHVVEDQKAAETPVVTPVKQFGTESDSRLRRSYIERQHENVDSLVNCVMKNIGFQHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIEYQDDNDLMAYWLSNTSALLFLLQQSLKSGGSTDATPVRKPPNPTSLFGRMTMGFRSSPSSANLPAPLEVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELTSFTSLCIQAPRTSKGVLRSGRSFSKDSPMGHWQSIIESLNTFLCTMKENFVPPVLIQKIFSQTFSYINVQFFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGTSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSSDVLASMKVLMAEDSNNAQSDSFLLDDTSSIPFSVDDLSTSLQERDFSEMKPADELLENPAFQFLNE 1512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06710 1512 SMART iq_5 735 757 IPR000048 GO:0005515
Vivi1g06710 1512 SMART iq_5 758 780 IPR000048 GO:0005515
Vivi1g06710 1512 SMART iq_5 783 805 IPR000048 GO:0005515
Vivi1g06710 1512 SMART iq_5 806 828 IPR000048 GO:0005515
Vivi1g06710 1512 SMART iq_5 854 876 IPR000048 GO:0005515
Vivi1g06710 1512 SMART iq_5 831 853 IPR000048 GO:0005515
Vivi1g06710 1512 ProSiteProfiles IQ motif profile. 809 836 IPR000048 GO:0005515
Vivi1g06710 1512 Gene3D Kinesin motor domain 65 663 IPR036961 -
Vivi1g06710 1512 Coils Coil 973 1049 - -
Vivi1g06710 1512 ProSiteProfiles IQ motif profile. 759 788 IPR000048 GO:0005515
Vivi1g06710 1512 Pfam DIL domain 1334 1437 IPR002710 -
Vivi1g06710 1512 FunFam Myosin heavy chain 253 308 - -
Vivi1g06710 1512 Gene3D - 668 731 - -
Vivi1g06710 1512 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Vivi1g06710 1512 ProSiteProfiles IQ motif profile. 832 861 IPR000048 GO:0005515
Vivi1g06710 1512 ProSiteProfiles Dilute domain profile. 1158 1458 IPR002710 -
Vivi1g06710 1512 FunFam unconventional myosin-Va 835 882 - -
Vivi1g06710 1512 CDD MYSc_Myo11 76 721 IPR036018 -
Vivi1g06710 1512 ProSiteProfiles Myosin motor domain profile. 62 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 FunFam Myosin 2 313 426 - -
Vivi1g06710 1512 Gene3D - 253 311 - -
Vivi1g06710 1512 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 FunFam Myosin XI D 736 785 - -
Vivi1g06710 1512 FunFam unconventional myosin-Va 786 834 - -
Vivi1g06710 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 789 884 IPR027417 -
Vivi1g06710 1512 Pfam Myosin head (motor domain) 64 721 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 786 IPR027417 -
Vivi1g06710 1512 CDD MyosinXI_CBD 1109 1481 IPR037975 GO:0007015
Vivi1g06710 1512 ProSiteProfiles IQ motif profile. 855 884 IPR000048 GO:0005515
Vivi1g06710 1512 Coils Coil 878 944 - -
Vivi1g06710 1512 Gene3D Myosin VI head, motor domain, U50 subdomain 313 602 - -
Vivi1g06710 1512 Gene3D - 786 833 - -
Vivi1g06710 1512 Gene3D - 834 883 - -
Vivi1g06710 1512 Gene3D - 736 785 - -
Vivi1g06710 1512 Gene3D - 440 624 - -
Vivi1g06710 1512 SMART DIL_2 1333 1440 IPR002710 -
Vivi1g06710 1512 PRINTS Myosin heavy chain signature 483 511 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 PRINTS Myosin heavy chain signature 430 458 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 PANTHER MYOSIN 58 1446 - -
Vivi1g06710 1512 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g06710 1512 FunFam Class V myosin 440 578 - -
Vivi1g06710 1512 Pfam IQ calmodulin-binding motif 857 876 IPR000048 GO:0005515
Vivi1g06710 1512 Pfam IQ calmodulin-binding motif 835 852 IPR000048 GO:0005515
Vivi1g06710 1512 Pfam IQ calmodulin-binding motif 787 805 IPR000048 GO:0005515
Vivi1g06710 1512 Pfam IQ calmodulin-binding motif 762 779 IPR000048 GO:0005515
Vivi1g06710 1512 Pfam IQ calmodulin-binding motif 738 756 IPR000048 GO:0005515
Vivi1g06710 1512 SMART MYSc_2a 57 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06710 Vivi-Chr1 156697141 156715514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06710 1 1511 Myosins gene family AT5G43900 73.698 0.0 2318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06710 K10357 - gmx:100791070 2706.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06710 1 156697141 156715514 Vivi1g06710 1 156697141 156715514 ECH
Vivi1g06710 1 156697141 156715514 Vivi6g03762 6 132637383 132648979 PCT