Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06696 ATGGAGGTGGTTATCAACGTTGACGAACACCACCGTGGCAAACGCAAGAAAATATCTGAGATCCAAGATGAGAAAGATGAGAATGTCCAAACAAGCATTGTTGGAGAGTCCAGCTCTAATGAAAACCGCAAAGAGCCTATGGCGGAAGAACTAGTGACCAATACTGTTTGGAGAAGAAGACCTGTATTAAAGCAACACCCAGGAGGAGGTCAGTTTGCTCCATCATCTCTCAAAGATGAGGATCACTCAAGTAAGTATAAGAAAAGAAAATTTAGTCTTTTGATTTTAGTTGAAAGGCTAGGTTTAATTCTTATACCTGCTTTATTATTAACCTTGACTCTTCCATTTTTGTGGAATACGGATTACTGGGAGGTTAGTATTTGGAAATGGGAAATCATGGTTCTTTTTTTAGTCTCGGGTCGGTTCTTGTCTCGTTGTATCATTAGGATTATTGTGTTTTGGATTCAAAGAAAATTTCAATGGAAGGTCAAGGTTCTTTACTATGTATATACTTTGAAGAAAACAATTCAGAATTGTCTGTGGTTATTGCTATTTTATTTAGCATGGTTTTTCTGGTTCCATAACCGACTTCACAGTGTGATCAACTCTGTTTTATTGGAATATTTGGAGAAAACTCTGTTGTGTTCCTTTCTGGCTGCTGCATTATGGCTCTTCAAATCCTTAATTGCTAAAGTTTTAACCAGTTATTTTTACTTGAGAACATATTTCGGCAAGATTGAAGAGTCGGTCATCAATATATTATTGATTAATATGCTTTCTGGACCACATATGGTTGAAATTCGAAGGGCTAAAGCACGAGAGGAGGAAAGGCTTGCTACTCGTAACTTTTCTACCATCACAATTGAAAGGTCAAGGAGTGAGATTAAGGATGGTGATGGAGTAACTCTCAATCTTTTGCATAAGCTGAATCCAAAATTTGTGCTTTCTTTGGAAATGAAGAGCTTAGTGAAAACATTTACCTACGGAGCACTTGATTTGGAAGACGACCATTCCACATTAGTCACAACTGAAAAGGATGCTAATGCAGCAACGGAACAAATATTCAGAAATATTGCTATGTGTGGTTCCAGGTCTATAGACATTGAGGACTTGATGCCTTTTATGATTGAAACTCAAGCTGCTCAAATTGTAAATCACTTTAAAGGAGCATCAGATTCTGGAAAAATAAGTCAAACTGCCTTGAAGGAGTGGATTCTGAATGTGTTCAGGGAGAGAAGAACACTAATTTTAAGAATAAATGACACCAAATCACCAGTCCCAAAGTTATACAACTTGCTGAACTTCTTAGCTGTCCTTGTGATTTCTGTTAGTTCGATTTTGACTTTGAAAATGATCACTACCAAAACACTTACCGTAATTGGGTCACAGTTCGTGTTGGTTGCATACATATTTAAAAACACATTGACCACTGGTTTTGAAGGAATATTTTTTGTTTTCTTTATGCATCCCTATGATGTAGGAGATAGATGTGACATTGATGATACAGAACTTGTTGTTAAAGAAATAAACTTAATGCAGACTGTGTTTATATCGTTTGATCAACAACTGGTAACCATACCCAACAGCGAACTTAGCAAGAAAGTCATATTTAATCATAATCACAGTCCTGACTTGGAAAAGGCTCTGCAATTCTATATTGATGTATCAACTCCCGATAACAAAGTTTTACTGTTGAAAGAGAGAATAAAGGAATACATGGACGGAAAGCAAGATCACTGGTATCCTTCACCTACCATAAACATGGATTGTCAGGAAAGACTGGACATGGTAAAAGTGGCTGTCTGGCCAACTCTTAGAATGAACTTCGTAGGCATGAGAGAAAGTGGCATCAGGAGATCTATGTTGATAGAAGAGTTGATGAAAATCTTAAGGGATCTTGACATTCTATACTTTATGCCTCTAGAGATAAATGTCGGAGCTTTTCCTACCACTTATGATTTGCTCCTTGTTAGTTGTTGGACAAAAACTACCTAG 1995 0.3704 MEVVINVDEHHRGKRKKISEIQDEKDENVQTSIVGESSSNENRKEPMAEELVTNTVWRRRPVLKQHPGGGQFAPSSLKDEDHSSKYKKRKFSLLILVERLGLILIPALLLTLTLPFLWNTDYWEVSIWKWEIMVLFLVSGRFLSRCIIRIIVFWIQRKFQWKVKVLYYVYTLKKTIQNCLWLLLFYLAWFFWFHNRLHSVINSVLLEYLEKTLLCSFLAAALWLFKSLIAKVLTSYFYLRTYFGKIEESVINILLINMLSGPHMVEIRRAKAREEERLATRNFSTITIERSRSEIKDGDGVTLNLLHKLNPKFVLSLEMKSLVKTFTYGALDLEDDHSTLVTTEKDANAATEQIFRNIAMCGSRSIDIEDLMPFMIETQAAQIVNHFKGASDSGKISQTALKEWILNVFRERRTLILRINDTKSPVPKLYNLLNFLAVLVISVSSILTLKMITTKTLTVIGSQFVLVAYIFKNTLTTGFEGIFFVFFMHPYDVGDRCDIDDTELVVKEINLMQTVFISFDQQLVTIPNSELSKKVIFNHNHSPDLEKALQFYIDVSTPDNKVLLLKERIKEYMDGKQDHWYPSPTINMDCQERLDMVKVAVWPTLRMNFVGMRESGIRRSMLIEELMKILRDLDILYFMPLEINVGAFPTTYDLLLVSCWTKTT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06696 664 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 44 650 IPR016688 -
Vivi1g06696 664 Gene3D - 490 539 IPR023408 -
Vivi1g06696 664 SUPERFAMILY Sm-like ribonucleoproteins 478 539 IPR010920 -
Vivi1g06696 664 MobiDBLite consensus disorder prediction 14 50 - -
Vivi1g06696 664 Pfam Mechanosensitive ion channel 431 579 IPR006685 GO:0016020|GO:0055085
Vivi1g06696 664 MobiDBLite consensus disorder prediction 14 30 - -
Vivi1g06696 664 FunFam Predicted mechanosensitive ion channel 490 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06696 Vivi-Chr1 155780384 155827821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06696 81 651 Mechanosensitive Ion Channel Family AT1G53470 38.042 3.72e-145 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06696 K22048 - gmx:102665658 495.352