Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06690 ATGTCGTCAACTTCTCTTTCCATTCTCACTGTTTTTCTTCACTTGCTGCTTTACTCATGCTCAGTGAATTTGGTTTCTATGAGTCTGTCGTTTTCTGGGTCATCTTCTGCTCCTCCTGTGTCATCTCCATCTTTTCAAGCTCCTACTGTTGCTCCAGGATCGAAAAAATATCCTGGCCATCTCAGTCAACACAATCGTAGGAAGTCTTATGCTTCGGCTCCTTCCCCTTCCCAAAGCCAAGCATGTGACCTAAGCTGTGAGGATCCACTCACAGAAACTCCCTTTGGTTCACCTTGTGGTTGTGTACTTCCCATGAGTGTCTTACTTTTACTGGATGCAGCTCCTTTGGTTGTTTATCCGGTAATTAATGAGTTAGAGATTGAACTTGCATCTGGAACATATTTGAAGCAAAGCCAGGTGAAGATAATGGGTGTTATTGCTGACACTCGAAATGAAGGAAAAAGCTTAGTTGAAGTTAACCTGGTACCGCTTGGTGAGAAATTTGACAATATAACTGTGGCTCTGATATCCCGGAGACTTTGGCACAAGAAAGTTCCTCTAAGTAGGAGTCTTTTTGGTGATTACACAGTCTTGGACACTACTTATCCAGGGATGCCATTATCTCTGCCGAATGGAACATCAACTGGGAGTGCTCCCCTTCCCGGCAGAAGTGCTGCAGGTCTCCCATTCAGCGTCGACTTTAACGGCAGCAGCAAGGATGATATGAACCTTAGTACCATAATCATCATTGCTGTATGTTCCATATTAATCTTATTGGGCATGGTTGGAGGAGCATTTTACATCATTTTTAAATGGAGGAAAGTCAGGAGACCATCAAGTGCGGCTGGCCTGCCATTCACACGGTCTCTAAACAAGAAATCTGCCATGGAGTCTACATTGTCTAGCAGAATGACAAGCTCAAGTTCAATGCCCCATATGTCCACCATAGCTACTTCTGTTCTTTCTGTGAAAAAGTTTTCCTTTTCTGAACTTATGAAAGCAACAGATACGTTCAGTTCACAAAGAATATTGGGGGAAGGAGGATTTGGGCGTGTTTATCATGGGAGATTGGATGATGGAACTGATGTTGCAGTTAAGTTACTAACAAAGGATTTTCATGAAAATGGAAACGATGAATTTACTGTGGAAGTTGAGTTGCTATGCCGTTTGCATCATCGTAATCTTGTGAAACTAATCGGCATATGCACAGAAGGGCACAAACGATGCTTGGTGTATGAGCTTGTTCGCAATGGGAGTGTCGAGTCTCATTTGCATGGTGCTGATCGGATAAATAACCCTCTAGATTGGGAAGCACGGAAAAAAATTGCCCTTGGAGCTGCAAGAGGATTGGCCTATCTTCACGAGGATTCTAATCCGCATGTAATCCACCGAGACTTTAAAACTGGCAACCTATTGTTAGAAGATGACTTCACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCAACTGAAGGAAGTCAATCTATTCCTACAAGAGTCATGGGGACTTTTGGGTATGTCGCCCCAGAATATGCAATGACAGGACATGTGCTTGTTAAAAGCGACGTTTACAGTTATGGTGTTGTCCTGCTCGAACTTCTAACAGGAAGAAAGCCAGTGGACATGTCTCAACCTGTTGGAGAGGAGAATCTCGTGGTATGGGCACGTCCACTGTTGAAAAGTAGAGAGGGTTTAGAACAGCTGGTGGATCCGAAATTGGCTGGAACTTATGACTTTGATGAAATGGCAAAGGTTGCTGCCATTGCTTCAACGTGTGTAAGCCGGGAGGTCAGTCAGAGACCCTTTATGGGTGAAGTTGTGCAGGCTCTTAAGTTGATATACAACGACAACGATGAGATGGACGTGGATCACTTCAGTCCAAGGGAATCTTCTGGTCGAGGGTCTGATTTTCAAGGTGATCTTTCTGATAGCAGTTGGTGGTATGATGAGCCTGAAGATATATCCGGCCGATTAACTTTTAGGCAAGCAATATCATCGTCCTTCATCACAATGGAATACAGTTCCGGTCCACTTGATGAACTGGAAAACAGAATGTTTTCAGGTTCAAGTTTGATGGGAAATGGTCTGTCTTTGTTACCGATTCGACTCGGGAATAGATCGGGTCCCTTGAAAACAGCTAGAAGAAACAAGCTACCCTTTCATAGGCTTACTGGAAGTCAAAGTGATCATTTGGCATTTCCTTCCAAGCCTGTTGGGAATGGAGGTTAA 2232 0.4377 MSSTSLSILTVFLHLLLYSCSVNLVSMSLSFSGSSSAPPVSSPSFQAPTVAPGSKKYPGHLSQHNRRKSYASAPSPSQSQACDLSCEDPLTETPFGSPCGCVLPMSVLLLLDAAPLVVYPVINELEIELASGTYLKQSQVKIMGVIADTRNEGKSLVEVNLVPLGEKFDNITVALISRRLWHKKVPLSRSLFGDYTVLDTTYPGMPLSLPNGTSTGSAPLPGRSAAGLPFSVDFNGSSKDDMNLSTIIIIAVCSILILLGMVGGAFYIIFKWRKVRRPSSAAGLPFTRSLNKKSAMESTLSSRMTSSSSMPHMSTIATSVLSVKKFSFSELMKATDTFSSQRILGEGGFGRVYHGRLDDGTDVAVKLLTKDFHENGNDEFTVEVELLCRLHHRNLVKLIGICTEGHKRCLVYELVRNGSVESHLHGADRINNPLDWEARKKIALGAARGLAYLHEDSNPHVIHRDFKTGNLLLEDDFTPKVSDFGLAREATEGSQSIPTRVMGTFGYVAPEYAMTGHVLVKSDVYSYGVVLLELLTGRKPVDMSQPVGEENLVVWARPLLKSREGLEQLVDPKLAGTYDFDEMAKVAAIASTCVSREVSQRPFMGEVVQALKLIYNDNDEMDVDHFSPRESSGRGSDFQGDLSDSSWWYDEPEDISGRLTFRQAISSSFITMEYSSGPLDELENRMFSGSSLMGNGLSLLPIRLGNRSGPLKTARRNKLPFHRLTGSQSDHLAFPSKPVGNGG 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06690 743 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Vivi1g06690 743 PANTHER OS01G0750732 PROTEIN 74 640 - -
Vivi1g06690 743 FunFam Receptor-like serine/threonine-protein kinase ALE2 415 628 - -
Vivi1g06690 743 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Vivi1g06690 743 FunFam Somatic embryogenesis receptor kinase 1 308 414 - -
Vivi1g06690 743 SUPERFAMILY Protein kinase-like (PK-like) 311 614 IPR011009 -
Vivi1g06690 743 CDD STKc_IRAK 344 614 - -
Vivi1g06690 743 Pfam Protein tyrosine and serine/threonine kinase 341 611 IPR001245 GO:0004672|GO:0006468
Vivi1g06690 743 Gene3D Transferase(Phosphotransferase) domain 1 415 631 - -
Vivi1g06690 743 ProSiteProfiles Protein kinase domain profile. 338 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06690 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Vivi1g06690 743 MobiDBLite consensus disorder prediction 42 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06690 Vivi-Chr1 154947169 154952787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06690 86 620 Receptor kinase-like Gene Family AT5G56890 55.254 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi1g06690 PK_Tyr_Ser-Thr 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06690 - - gmx:100792309 896.73