Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06681 ATGCCTACACCTCAATTTCTCCATAAAATCTCTACTTTTATGGTAACTTCTTATTCACAATCATCGCTTCTCGGATTATCCGTATTAGAACTTGCTGCAATATGCGTGAATCTCACTCTTGTTCTCTTGTTCCTCTTTGTTGTCTCGGTAAAAAAGATTCTCGTCAATAAGAGAAATCGAATAGGTAAAGACAACACTACTGTGAGCGATAGTGTTGTTATTGATAGAGAAACAACAAGTCATGTTTCAAATATAAGTGGTTGGTTCAAGTTATCAGTGTTGTCTTGTTTCTATGTTCTGTGTGTGCAACTTTTGGTCTTGGGATTTGACTTATGTGTTTTGATATGGGGTGAGACTTTACACTGGTTGGTTCTTTTTGTTTCGGCTTCACAGGTTTTGGCTTGGTGTGTTTTGAGCTTCTCGGCTTTGAATAGCAAGTTTAAGGGGTTAGAGAAGTTTCCATTTTTGTTAAGAGTTTGGTGGATTTTATCGTTTGTTATTTGCTTGTGTGGTTTATATGTTGATGGAAGAGGCTTTTGGGTGGAGGGTTATGAGTACTTTTGTTCTCGTGCTGTTGCGAATTTCGCTGTTACACCAGGACTTGCTTTTTTAGGTGTGGTTGCGGTTAGGGGGGTTACTGGTATACAGGTTTGTAAAAACTCTGATCTTCAAGAGCCATTGCTTGTTGTTGAAGGAGAAGAAGAACTAGGGTGTCTTAAAGTTACTCCGTATTGGGATGCAGGACTTTTTAGCTTAGCGACGCTTTCTTGGCTGAATCCGCTTCTTTCCCTTGGTGCAAAGAGACCACTTGAGCTTAAGGATATTCCACTTGTTGCGCCGAGTGAAAGAGCTAAGACGAGTTACAAGGTTGTGAATTCTAACTGGGAGAAGTTGAAGGCTGAAAATCAAAATCAAAATCTATCGAAGCAACCTTCGTTAGCTTGGGCATTACTCAAGTCATTTTGGAAGGAAGCGGCTTTGAATGCTGTATTTGCTGGCTTGACTACTTTGGTTTCGTATGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGGGTGGTATAGAGACTTTTGCTCACGAGGGTTATATCCTTGCTGGTATATTCTTTATGGCGAAGCTTGTGGAGACGCTGACGACTAGACAGTGGTATCTAGGAGTGGACATATTAGGTATGCATGTTCGGTCGGCTCTAACTGCAATGGTGTATAGGAAGGGACTCAGACTCTCGAGCTCGGCGAAGCAAAGTCATACAAGTGGGGAGATTGTTAACTACATGGCTGTTGATGTTCAGAGGGTTGGGGATTTTGCTTGGTACCTTCATGACATGTGGATGCTGCCTCTGCAAATTGCTCTTGCTCTTGTAATTTTGTATAAGAATGTTGGAATTGCTTTTGTTGCAACATTGATTGCTACAATCATTTCCATTGTGGTCACTATTCCTGTGGCTAGGATACAAGAAGAGTATCAAGACAAGTTGATGTCTGCTAAGGATGAAAGGATGAGAAAAACATCAGAGTGTCTGAGAAATATGAGGATTCTTAAGCTGCAAGCTTGGGAGGATCGATATAGAATAAGATTGGAGGAAATGCGCGGAGTAGAGTACAAGTGGCTAAGGAAAGCACTTTACTCTCAGGCTTTCATAACTTTCATTTTTTGGAGCTCCCCTATATTTGTTTCGGCAGTCACATTTGCTACTACTATATTTTTAGGAACTCAGTTGACTGCAGGTGGAGTTCTCTCTGCTTTAGCTACTTTCAGGATTCTCCAAGAACCTCTAAGAAATTTTCCTGATTTGGTATCAACCATGGCTCAGACAAAGGTTTCTCTTGATCGCATATCCAATTTCCTGCAGGATGAAGAATTGCGGGAAGATGCAACTACTGTCTTGCCTCCCGGGACTTCTAACACTGCCATAGAAATTATGGATGGTGTCTTTAGCTGGGACACTTCTTCCTCTAGGCCTACTCTATCAGGAATACATGTGAAAGTGGAGAGGGGAATGAGTGTAGCTGTTTGTGGCACTGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCAAAGCTTTCTGGTGAAGTAAGACTGTGTGGTTCTGCCGCATATGTTTCACAATCAGCATGGATACAGTCAGGAAATATAGAAGAAAATATTCTGTTTGGAAACCCAATGGATAAAGCAAAGTACAAAAATGTTATTCACGCTTGTTCACTAAAAAAGGACCTGGAGCTTTTCTCACATGGAGACCAAACAATTATTGGTGAAAGAGGTATAAATATGAGCGGTGGCCAGAAGCAACGGATTCAGCTTGCACGAGCACTTTACCAAGATGCTGATATTTATCTCCTTGATGATCCCTTTAGTGCACTTGATGCCCACACTGGATCAGAACTATTCAGGGAGTATGTATTGACAGAACTAGTAGATAAAACTGTCATTTTTGTGACCCATCAAGTTGAATTTCTTCCAGCTGCTGATTTGATACTGGTTCTTAAAGAAGGCCAGATCATACAGGCAGGAAAGTATGATGATCTTCTACAGGCAGGAACAGATTTTAGAACTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGACATTCCTAATCACTCTTCCTCAGAAGATTCAGATGAAGATGAGTCCTTGGATACATCTATTATGTCCATGAAGAAATCTATTTCTTCTGTTAATGACATTAGCAGTTTGGCAAAGGAAGTTCCCGAGGGATCTTCAGATTCTAAAGAAATTAAGGAAAAGAAGAAGAAGGCAAAGCGCTCAAGAAAAAAACAGCTTGTCCAGGAAGAGGAGAGGGTTAGAGGTAGAATCAACATGAAAATGTACTTGTCTTACATGTCTGCCGCATATAAAGGCTTATTGATTCCCCTCATCATCATTGCTCAAGCACTATTCCAGTTCCTTCAGATTGCCAGCAATTGGTGGATGGCTTGGGCGAATCCTCAGACAGAGGGAGACGAGCCCAAAGTAACGCCCATGAATCTTCTTCTTGTTTACATGGCCCTTGCCTTTGGAAGCTCGTGTTTCATATTCGTAAGGGCTGTTCTTGTTGCTACATTCGGTCTAGCAGCAGCGCAGAAGCTATTCTTCAACATGCTTCGAAGTATCTTTCATGCACCAATGTCGTTCTTTGATTCTACACCAGCTGGAAGGATCCTGAACCGTGTTTCAATTGATCAAAGTGTTGTGGACCTTGACATTCCTTTTAGACTTGGAGGGTTTGCTTCATCAACAATACAGCTTATTGGCATTGTTGCTGTAATGTCACAGGTTACATGGCAAGTTTTGCTCCTAGTTGTCCCAATGGCAATTGGTTGTTTGTCGATGCAGAAATACTACATTGCTTCATCAAGGGAACTGGTACGTATTGTAAGCATCCAGAAATCTCCAATTATACAACTCTTTGGTGAATCAATTGCTGGAGCAGCCACCATCAGAGGTTTTGGACAAGAAAAAAGGTTCTTGAAAAGAAACCTCTATCTTCTGGATTGTTTTGCGCGACCATTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGTCTGCGCATGGAATTACTTTCAACTTGTGTATTTGCTTTTTGCATGTTCTCACTTGTGACATTTCCTCGTGGAAGTATTGACCCCAGCATGGCTGGACTTGCTGTGACGTATGGCCTGAATTTAAATGGACGCTTGTCTCGTTGGATACTTAGCTTTTGTAAACTTGAAAACAAAATAATATCTATTGAAAGAATCTATCAGTACAGTCAAATTCCTAATGAAGCACCACAAGTTATTGAAGAATCTCGCCCGCCATCCTCATGGCCTGAGAATGGGACAATCCAACTAATTGATTTGAAGGTTCGTTACAAGGAAAATCTTCCCTTGGTGCTTCATGGAGTATCCTGCCTATTTCCTGGAGGAAAGAAGATTGGAATAGTTGGACGAACTGGCAGTGGCAAATCTACTCTGATTCAGGCATTATTTCGATTGGTTGAACCAGCAAACGGGAGTATCCTTATAGACAACATTGATATCTCAGGAATTGGCCTTCATGACCTTCGAACCCATTTGAGTATCATACCACAAGATCCGACCTTATTTGAGGGCACCATTCGAGGCAATCTGGATCCTCTTGAAGAGCATTCTGATAAAGAGATTTGGGAGGCACTAGATAAGTCTCAGCTTGGAGAGATCATTCGTGCGAAAGGAGAAAAACTCGATACACCAGTGCTAGAAAATGGTGATAATTGGAGTGTAGGACAACGGCAACTTGTTTCTCTTGGCCGAGCTCTGCTGAAGCAGTCAAAGATTCTTGTACTCGATGAAGCAACAGCATCTGTTGATACTGCTACTGATAATCTTATCCAGAAGGTTATCCGAGAAGAGTTCAAAGACTGCACTGTTTGCACTATTGCACATCGTATTCCTACTGTGATTGACAGTGATCTTGTCCTAGTACTCAGCGATGGTCTAGTTGCAGAGTTTGACACTCCATCGCGGCTATTAGAAGACAAGTCATCCATGTTTTTGAAGTTGGTGACTGAATATTCATCGCGATCAAATGGCATGCCAGAGCTTTAA 4596 0.4156 MPTPQFLHKISTFMVTSYSQSSLLGLSVLELAAICVNLTLVLLFLFVVSVKKILVNKRNRIGKDNTTVSDSVVIDRETTSHVSNISGWFKLSVLSCFYVLCVQLLVLGFDLCVLIWGETLHWLVLFVSASQVLAWCVLSFSALNSKFKGLEKFPFLLRVWWILSFVICLCGLYVDGRGFWVEGYEYFCSRAVANFAVTPGLAFLGVVAVRGVTGIQVCKNSDLQEPLLVVEGEEELGCLKVTPYWDAGLFSLATLSWLNPLLSLGAKRPLELKDIPLVAPSERAKTSYKVVNSNWEKLKAENQNQNLSKQPSLAWALLKSFWKEAALNAVFAGLTTLVSYVGPYMISYFVDYLGGIETFAHEGYILAGIFFMAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDFAWYLHDMWMLPLQIALALVILYKNVGIAFVATLIATIISIVVTIPVARIQEEYQDKLMSAKDERMRKTSECLRNMRILKLQAWEDRYRIRLEEMRGVEYKWLRKALYSQAFITFIFWSSPIFVSAVTFATTIFLGTQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISNFLQDEELREDATTVLPPGTSNTAIEIMDGVFSWDTSSSRPTLSGIHVKVERGMSVAVCGTVGSGKSSFLSCILGEIPKLSGEVRLCGSAAYVSQSAWIQSGNIEENILFGNPMDKAKYKNVIHACSLKKDLELFSHGDQTIIGERGINMSGGQKQRIQLARALYQDADIYLLDDPFSALDAHTGSELFREYVLTELVDKTVIFVTHQVEFLPAADLILVLKEGQIIQAGKYDDLLQAGTDFRTLVSAHHEAIEAMDIPNHSSSEDSDEDESLDTSIMSMKKSISSVNDISSLAKEVPEGSSDSKEIKEKKKKAKRSRKKQLVQEEERVRGRINMKMYLSYMSAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDEPKVTPMNLLLVYMALAFGSSCFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMSQVTWQVLLLVVPMAIGCLSMQKYYIASSRELVRIVSIQKSPIIQLFGESIAGAATIRGFGQEKRFLKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTCVFAFCMFSLVTFPRGSIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIPNEAPQVIEESRPPSSWPENGTIQLIDLKVRYKENLPLVLHGVSCLFPGGKKIGIVGRTGSGKSTLIQALFRLVEPANGSILIDNIDISGIGLHDLRTHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIRAKGEKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKVIREEFKDCTVCTIAHRIPTVIDSDLVLVLSDGLVAEFDTPSRLLEDKSSMFLKLVTEYSSRSNGMPEL 1531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06681 1531 Gene3D - 1268 1521 IPR027417 -
Vivi1g06681 1531 Coils Coil 487 507 - -
Vivi1g06681 1531 Gene3D - 634 868 IPR027417 -
Vivi1g06681 1531 ProSitePatterns ABC transporters family signature. 765 779 IPR017871 GO:0005524|GO:0016887
Vivi1g06681 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1285 1519 IPR003439 GO:0005524
Vivi1g06681 1531 Pfam ABC transporter 1302 1450 IPR003439 GO:0005524
Vivi1g06681 1531 Gene3D ABC transporter type 1, transmembrane domain 290 622 IPR036640 GO:0005524|GO:0016020
Vivi1g06681 1531 Gene3D ABC transporter type 1, transmembrane domain 927 1266 IPR036640 GO:0005524|GO:0016020
Vivi1g06681 1531 Pfam ABC transporter 658 792 IPR003439 GO:0005524
Vivi1g06681 1531 CDD ABCC_MRP_domain1 640 840 - -
Vivi1g06681 1531 SMART AAA_5 1311 1496 IPR003593 GO:0016887
Vivi1g06681 1531 SMART AAA_5 667 848 IPR003593 GO:0016887
Vivi1g06681 1531 Pfam ABC transporter transmembrane region 329 594 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g06681 1531 Pfam ABC transporter transmembrane region 968 1215 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g06681 1531 FunFam ABC transporter C family member 5 929 1266 - -
Vivi1g06681 1531 CDD ABC_6TM_ABCC_D2 966 1260 IPR044726 GO:0140359
Vivi1g06681 1531 FunFam ABC transporter C family member 5 625 872 - -
Vivi1g06681 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 968 1238 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g06681 1531 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 246 1522 - -
Vivi1g06681 1531 SUPERFAMILY ABC transporter transmembrane region 315 625 IPR036640 GO:0005524|GO:0016020
Vivi1g06681 1531 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 606 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi1g06681 1531 SUPERFAMILY ABC transporter transmembrane region 965 1265 IPR036640 GO:0005524|GO:0016020
Vivi1g06681 1531 MobiDBLite consensus disorder prediction 909 940 - -
Vivi1g06681 1531 CDD ABC_6TM_ABCC_D1 327 614 IPR044746 GO:0140359
Vivi1g06681 1531 Coils Coil 920 940 - -
Vivi1g06681 1531 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 863 IPR003439 GO:0005524
Vivi1g06681 1531 CDD ABCC_MRP_domain2 1283 1503 - -
Vivi1g06681 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 635 862 IPR027417 -
Vivi1g06681 1531 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1515 IPR027417 -
Vivi1g06681 1531 FunFam ABC transporter C family member 3 1268 1520 - -
Vivi1g06681 1531 FunFam ABC transporter C family member 10 309 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06681 Vivi-Chr1 154780864 154788385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06681 625 856 Calmodulin-binding Proteins AT2G36910 29.839 1.85e-20 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06681 - - cam:101514243 2533.06