Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06650 ATGGAAAAAATTAAGGACATCAACGACACCAAAGAGTTGTGGAAAGTGGCGGTGAGAGTTTCCCATAAATGGAAGGTAGTCTCCAACAACAAGGAGCACTTTGAGATGATATTTGAAGACAAAGAGGGTTCTGATATCCACGTTGTTGTTCCAACTGCATGCACGGCCGCATACACTGAGAAGTTTGAGGTGGACCGGACCTATACTGTGTCTAATTTTTCTGTGCAGCCTAATAACTTAGTTTTCAAACCAAGCTCCCACAAGTTCTTAGTGAAATTTACTGGAGGAACTGCTGTTGGTGATGTTGACAAACATGACATACCCCCCAAACCACGCCCCTTCACCAGTTTCCCTGACATCATTAACGGGAACTTTCAGAAGAATGTACTCATTGATGTTATTGGTATGCTCGAAAGTGTTGGGTATCAACAGACGCAAATTGGTGGGAAAAAGTTTCAGGCTAATTTCTTACTCCGAGATGCAAGCAACAACACCCTAAATTGCACCCTCTGGGAAGACTATGCTAAACAGTTTTTTAAGTTTAACGAGGACAACTCTGCGACAACTGGGCCGATTGTTATTATGATTCAGTATGCTAAAGTAAAAGAAGCTGGTCAATACCCTCTCTCCGTTACCAACACATTCCATGTTACGAAGCTTCTTATCAACGCGGATTTGCCGACTGTCAAGGACTTCGTTAAAACATTCCCAAAGGAATCGTTGCGCGTCGTTTCTACGCAACTGATCTCTCAGTCTCAACAATACTCCCGCACATCCACAAATGATAATATTGGACAAAGTCATCTGCAGAAATTGCTCAAAGGGGCTATTTCTGTATCACTTAGTGAGATGAAGAAAATCCGCGAGGTAAAGAGGCGTAAATCTGAATTATAA 894 0.4228 MEKIKDINDTKELWKVAVRVSHKWKVVSNNKEHFEMIFEDKEGSDIHVVVPTACTAAYTEKFEVDRTYTVSNFSVQPNNLVFKPSSHKFLVKFTGGTAVGDVDKHDIPPKPRPFTSFPDIINGNFQKNVLIDVIGMLESVGYQQTQIGGKKFQANFLLRDASNNTLNCTLWEDYAKQFFKFNEDNSATTGPIVIMIQYAKVKEAGQYPLSVTNTFHVTKLLINADLPTVKDFVKTFPKESLRVVSTQLISQSQQYSRTSTNDNIGQSHLQKLLKGAISVSLSEMKKIREVKRRKSEL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06650 297 Pfam Domain of unknown function DUF223 35 130 IPR003871 -
Vivi1g06650 297 CDD RPA1_DBD_B_like 132 237 - -
Vivi1g06650 297 Gene3D - 1 100 IPR012340 -
Vivi1g06650 297 CDD RPA1_DBD_A_like 15 99 - -
Vivi1g06650 297 Gene3D - 105 244 IPR012340 -
Vivi1g06650 297 SUPERFAMILY Nucleic acid-binding proteins 3 99 IPR012340 -
Vivi1g06650 297 Coils Coil 280 297 - -
Vivi1g06650 297 SUPERFAMILY Nucleic acid-binding proteins 113 239 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06650 Vivi-Chr1 154129245 154130873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06650 14 269 Core DNA Replication Machinery Family AT5G08020 22.222 2.34e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06650 - - vvo:131639369 558.525