Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06643 ATGGAACTCCAAATATTGGTTTCTTGGTTACTTTTCTCTGCAGGCTTCATTTGGTTCTTATTCTTAGCCATAAAAACACAATCCAAATCCATAAAAACACCTTCCTCTACCACCAACACCACAATTCCCAAATCTTACCCCATTTTCGGTTCTGCTTTTTCTCTGCTAGCCAACTTCCACCGCCGCGTGCAATGGACCTCCGATATCCTCCAAACCATCCCTTCCTCCACCTTCGTCTTCCACCGCCCTTTAGGCTCCCGCCAAGTCTTCACGGCTCAACCCGCCGTGGTGCAACACATTCTCAAAACCAATTTCCTTTGCTACGGCAAAGGTCTCACGTTTTATCAATCTATCAATGATTTCCTCGGCGACGGAATCTTCACAGTAGACGGTGAAGACTGGAAGCATCAAAGACAAATCTCCAGCCACGAATTCAACACTAAATCCCTCCGCAAATTCGTTGAAACAGTAGTTGACGTCGAACTCTCCGATCGCCTTCTTCCTGTTCTCTCCGAAGCTTCTAACAACCAAACCACTCTTGATTTCCAAGACATCCTCCAACGTTTCACGTTCGATAACATTTGCATGATCGCGTTTGGATATGATCCAGAGTATCTCCTCCCTTCCCTTCCTGAAATACCTTTTGCAAAAGCCTTCGACGAAGCCTCGCAACTCAGCATCGAGAGGTTGAATTCAGTGATTCCATTACTATGGAAAGTAAAAAAATTCCTGAACATCGGAACAGAGCGAAGGCTGAAAGAAGCAGTTGCAGAAGTAAAAGAACTCGCCAATAAAATAGTTAAGAATAAGAAAAAAGAGCTTAAAGAAAAAGCAGTATCGTTGGAATCAGTTGATCTTTTATCCAGATTTTTAAGTTCGGGTTATTCGGATGATTCATTTGTTATTGATATGGTAATAAGTTTTATTCTTGCTGGGAGAGATACAACTTCAGCTGCACTCACATGGTTCTTTTGGTTACTCTCTAACCATAGTCATGTTGAGAATGAGATTCTCAAAGAGATTACTGGAAAATCAGAAACTGTTGGCTACGATGAGGTGAAGGATATGGTTTATACTCACGCGGCGCTATGCGAGAGTATGAGGCTATATCCTCCGCTTCCGGTGGATACTAAAGTAGCGGCGCACGACGACATTTTGCCGGATGGGACTTTAGTGAAGAAAGGGTGGAGAGTGACCTATCATGTATATGCTATGGGAAGATCTGAGAAGATATGGGGACCGGATTGGGCTGAGTTTCGACCGGAGAGGTGGTTGAGACGGGATGAGGTTGGCAAGTGGAGCTTTATTGGGATAGATTATTATAGTTATCCGGTTTTTCAAGCTGGGCCGAGGGTGTGTATAGGGAAGGAAATGGCGTTCTTGCAGATGAAGAGGGTGGTTGCCGGGATTATGGGGCGGTTTAGGGTGGTTCCGGCGATGGTTGAAGGGATTGAGCCGGAGTACACTGCGCATTTTACCTCATATATGAAAGGTGGGTTCCCGGTAAAGATTGAAAAGCGAAGCCACTTATATGAATAA 1539 0.4451 MELQILVSWLLFSAGFIWFLFLAIKTQSKSIKTPSSTTNTTIPKSYPIFGSAFSLLANFHRRVQWTSDILQTIPSSTFVFHRPLGSRQVFTAQPAVVQHILKTNFLCYGKGLTFYQSINDFLGDGIFTVDGEDWKHQRQISSHEFNTKSLRKFVETVVDVELSDRLLPVLSEASNNQTTLDFQDILQRFTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDEASQLSIERLNSVIPLLWKVKKFLNIGTERRLKEAVAEVKELANKIVKNKKKELKEKAVSLESVDLLSRFLSSGYSDDSFVIDMVISFILAGRDTTSAALTWFFWLLSNHSHVENEILKEITGKSETVGYDEVKDMVYTHAALCESMRLYPPLPVDTKVAAHDDILPDGTLVKKGWRVTYHVYAMGRSEKIWGPDWAEFRPERWLRRDEVGKWSFIGIDYYSYPVFQAGPRVCIGKEMAFLQMKRVVAGIMGRFRVVPAMVEGIEPEYTAHFTSYMKGGFPVKIEKRSHLYE 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06643 512 CDD CYP86A 77 500 - -
Vivi1g06643 512 Gene3D Cytochrome P450 28 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PANTHER CYTOCHROME P450 31 502 - -
Vivi1g06643 512 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 Coils Coil 245 284 - -
Vivi1g06643 512 Pfam Cytochrome P450 43 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g06643 512 SUPERFAMILY Cytochrome P450 43 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06643 Vivi-Chr1 153979501 153981579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06643 3 510 Cytochrome P450 AT3G48520 45.597 2.25e-150 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06643 K20769 K20768 ag:AAG33645 918.687