Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06636 ATGGGCATGCCCGAAAACATAATTGTTGGTTCTCACGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGGGTAGTACTGAATATTAATGGAGAAGAAGCTGAAATTCAAACCAGCAATGGAAACAAGGTAGTTTCCCGTTTGTCAAAATTACATCCGAAGGATACAGACGCTCCTGTAGATGGAGTTGATGATATGACCAAACTTGCTTATTTGCATGAGCCAGGAGTGCTGTATAATTTGGAAACTCGATACAAGATCAATGAAATATATACTTATTCTGGAAATATTCTTATCGCGATCAATCCCTTTCAAAATCTTCCACACCTGTATGATGCTAGTGAAATGAAAAGATACAAGGGAGAGAAAATGGGAAGTTTAAGCCCACACGTTTTTGCTATTGCTGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAACTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACGACCAAAATGCTTATGCTTTACTTGGCATATTTGGGTGGTCACACTGCATCGGAAGGACGGACTGTTGAGCAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAACGCCAAAACAGTTAGAAATGACAATTCCAGCCGCTTTGGAAAATTTGTCGAGATTCAATTTGATAAGTATGGACGAATATCCGGTGCAGCTATTAGAACTTATCTGCTTGAGAAGTCTCGTGTTTGCCAAATCTCAGATCCGGAGCGTAATTATCATTGTTTCTACCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCGAGATCATTTCATTACCTAAATCAGTCCAGTTGCTATGAATTAGCTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAAAGAGCCATGGATATTGTGGGAATCAGTCAAGAGGAACAGGATGCAATTTTCAGACTTGTTGCTGCTATTCTCCATCTTGGAAACGTTAGATTTAAATCAGAAGAAGATTCATCAGTTCTAGCAGATGAAGCCTCCGTGTTCCATCTCCAAACAACCGCAGAACTTCTAATGTGTGATCCTAATGCTGTGGAAGTTGCACTTTGTAAGCGTGTGATGATCACCCCAGAAGAAATCATCGAAAGAAGCCTTGATCCTCTTGCTGCAACAGTTAGCAGGGATGGTTTGGCAAAGACATTATATTCTCGTTTATTTGATTGGTTAGTCCAGAAAATTAATCTCTCCATTGGGCAGGATCCTAACTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAGAGCTTTCAAACAAATAGTTTTGAGCAGTTTTGTATTAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCACGTGTTTAAGATGGAGCAAGAGGAATACACAAAAGAAGGGATTGAATGGAGCTACTTAGAATTTGTTGATAATCAAGATGTACTAGATCTCATTGAAAAGAAACCTGGTGGAGTAGTTGCTCTGCTTGATGAGGCTTGCATGTTTCCCAAATCAACTCATGAAACATTTTCTCAAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAACCAAAATTGGCACGCTCAGACTTCACTATTGTTCATTATGCAGGGGAGGTCAAGTATCAATCTGAGCACTTCATAGACAAAAACAAAGACTATGTTGTTCCCGAACATCAAGACATGCTAAGTACTTCTAAATGTTCATTTGTATCAGGCCTTTTTCCTCCACTCTCAGAGGAGACAGCCAAATCTGCTAAGTTTTCTTCTATTGGTTCTCGTTTTAAGCTTCAACTACAACATTTGATGGAAGCACTCAATCTGACAGAGCCCCACTATATCAGATGTGTGAAGCCGAATAGTCAATTAAAACCTGGGATATTTGAGAATATGAACGTCATGCATCAGTTACGTTCTGGTGGTGTCCTTGAAGCAGTGAGGATTAAATGTGCTGGATTCCCCACTCACAGGACCTTTCAGGAATTTTTAACTCGACTAGGCATTCTTGCTCCAGAGATTCTTCACGGAAACTTCGAAGAAATGGAATCATGTAAAAAGATTTTAGAGAAGGTTGGGCTGACAGGTTATCAGATAGGAAAAACAAAAATATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCGGAGAGCATACATGCTCAGCAGTTCTGCAACAATTATCCAAAAGCAGACTAAAACTTATTTTAGCCGGAAAACATATATTGCACTGCGAAAGTCCTCTATCTTTGTGCAATCTATTTGCAGAGGAGAAGTGGCACGAAGTCAATATTATCACATGAAGAGGAAAGCAGCTGCCATCAAAATTCAAACCAAATCACGTGGAAGATTTGCCAGAAAATGCTACTTTGAATTAAGGATTTCTGCTATTGTCTTACAGACAGGTTTTCGGGCTATGGCTGCTCGACATGCTCGTGATAAATTGAGATATAGAAAGCAAACTGGGGCATCGACTTTTATCCAGTCCTATTGGCGGCGACACAAAGCTCTCGTTGACTATCAGAGTCTAAAGAAAGAGTTAGTCATTTCACGAAGTGTTAATCACTCCAGCGATGAACATGAACAGAAGATTGCGGAGATATCACCGGAAAATGAAAGTCCTTCCAAGGAAAAATCTTCAAATTTATTACATGAAGAGTCCCCGAGTTCTTTCCAAGATAATGAAAGCATTGAAGCTATCAGAGTTTTCTCTAATCCCTTCAGAGACAGTGAAAGCAATGAAGCTAGTATGGATATCTCTAGTACCCTCCATGACACTGAAAGCAATGAAGTTATTAGGGATTTATCTAGTCCCCTCAGAGACACTGAAAGCAATGAAGCTATTAGGGATTTATCTAGTCCCCTCAGAGACACTGAAAGCAATGACGGTATTAATTTATCTAGTTCCCTCAGAGACACTGAAAAGATTGAGGCTCTTTCTGCAGAAATAAAAAGTTTAAAGGTCATGTTGAAGGAAGAAAAACAAAAATCTGATGAATATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGCGAAGAGTTACGCAAAAAGTTAGCCGAAACCGAAAAACGAGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAAGTCAAGTTGCCGAGCTGAAAACAATCTTAAGTACTTCATCAAGGTTGAGTTCAACTTTTCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCTGCCCCCGTTTCAAATCCAGAACCAGTCTCTTCTGCAGACTCAAACTCTTTTCAACTAGTAGTTCAGGATATCACTGCCGGTGAAGAATCAGGATCTGAAAGTGAAAAAGAAGGTTCGTTTGATGATTTCTTTTAG 3426 0.3975 MGMPENIIVGSHVWVGDPELVWIDGVVLNINGEEAEIQTSNGNKVVSRLSKLHPKDTDAPVDGVDDMTKLAYLHEPGVLYNLETRYKINEIYTYSGNILIAINPFQNLPHLYDASEMKRYKGEKMGSLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKMLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKYGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELAGVNAAQEYLSTKRAMDIVGISQEEQDAIFRLVAAILHLGNVRFKSEEDSSVLADEASVFHLQTTAELLMCDPNAVEVALCKRVMITPEEIIERSLDPLAATVSRDGLAKTLYSRLFDWLVQKINLSIGQDPNSKCLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEGIEWSYLEFVDNQDVLDLIEKKPGGVVALLDEACMFPKSTHETFSQKLYQTFKDHKRFIKPKLARSDFTIVHYAGEVKYQSEHFIDKNKDYVVPEHQDMLSTSKCSFVSGLFPPLSEETAKSAKFSSIGSRFKLQLQHLMEALNLTEPHYIRCVKPNSQLKPGIFENMNVMHQLRSGGVLEAVRIKCAGFPTHRTFQEFLTRLGILAPEILHGNFEEMESCKKILEKVGLTGYQIGKTKIFLRAGHMAELDARRAYMLSSSATIIQKQTKTYFSRKTYIALRKSSIFVQSICRGEVARSQYYHMKRKAAAIKIQTKSRGRFARKCYFELRISAIVLQTGFRAMAARHARDKLRYRKQTGASTFIQSYWRRHKALVDYQSLKKELVISRSVNHSSDEHEQKIAEISPENESPSKEKSSNLLHEESPSSFQDNESIEAIRVFSNPFRDSESNEASMDISSTLHDTESNEVIRDLSSPLRDTESNEAIRDLSSPLRDTESNDGINLSSSLRDTEKIEALSAEIKSLKVMLKEEKQKSDEYERKYVEAQGSSEELRKKLAETEKRVYQLQDSLNRMISSMSSQVAELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVSNPEPVSSADSNSFQLVVQDITAGEESGSESEKEGSFDDFF 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06636 1141 Gene3D - 437 621 - -
Vivi1g06636 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 783 IPR027417 -
Vivi1g06636 1141 Gene3D - 252 310 - -
Vivi1g06636 1141 Gene3D Myosin VI head, motor domain, U50 subdomain 312 599 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 1126 1141 - -
Vivi1g06636 1141 Pfam Myosin head (motor domain) 64 718 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 ProSiteProfiles IQ motif profile. 756 785 IPR000048 GO:0005515
Vivi1g06636 1141 ProSiteProfiles Myosin motor domain profile. 62 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 Gene3D - 954 1076 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 920 938 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 866 895 - -
Vivi1g06636 1141 Gene3D Kinesin motor domain 65 660 IPR036961 -
Vivi1g06636 1141 SMART MYSc_2a 56 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 FunFam Myosin heavy chain 252 307 - -
Vivi1g06636 1141 Pfam IQ calmodulin-binding motif 783 801 IPR000048 GO:0005515
Vivi1g06636 1141 Gene3D - 732 782 - -
Vivi1g06636 1141 Gene3D - 783 832 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 939 968 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 866 907 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 1079 1125 - -
Vivi1g06636 1141 Coils Coil 988 1043 - -
Vivi1g06636 1141 SMART iq_5 732 754 IPR000048 GO:0005515
Vivi1g06636 1141 SMART iq_5 831 853 IPR000048 GO:0005515
Vivi1g06636 1141 SMART iq_5 803 825 IPR000048 GO:0005515
Vivi1g06636 1141 SMART iq_5 755 777 IPR000048 GO:0005515
Vivi1g06636 1141 SMART iq_5 780 802 IPR000048 GO:0005515
Vivi1g06636 1141 CDD MYSc_Myo11 76 718 IPR036018 -
Vivi1g06636 1141 Pfam Myosin N-terminal SH3-like domain 9 46 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 Gene3D - 664 731 - -
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 1079 1141 - -
Vivi1g06636 1141 ProSiteProfiles IQ motif profile. 832 859 IPR000048 GO:0005515
Vivi1g06636 1141 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 PANTHER MYOSIN 54 1049 - -
Vivi1g06636 1141 FunFam Class V myosin 437 580 - -
Vivi1g06636 1141 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 PRINTS Myosin heavy chain signature 427 455 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g06636 1141 MobiDBLite consensus disorder prediction 920 978 - -
Vivi1g06636 1141 ProSiteProfiles IQ motif profile. 781 805 IPR000048 GO:0005515
Vivi1g06636 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 784 856 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06636 Vivi-Chr1 153429349 153447658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06636 1 1047 Myosins gene family AT1G54560 61.968 0.0 1375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06636 K10357 - gmx:100803485 1753.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06636 1 153429349 153447658 Vivi1g06636 1 153429349 153447658 ECH