Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06634 ATGGAAGGAAACTATCTCAACAGAAACACAACAACTACTCATAGAGATCATCATCATCATCATCACCATCATGGATATGAGGAGCATTCATGGGGAACATCATGGCCTGCAAGAAACTATGCTTGTAGCTTTTGCAAAAGAGAGTTTAGATCAGCTCAAGCTTTAGGTGGACACATGAATGTTCATAGAAGAGATAGGGCAAGGTTAAGATCATCATTAATATCTTCTTGGGTTAATTCTGATCAATGCCCTAACAACAACAACAACAACAATAATATTACTAATAAACCTAACCCTAATGATGAGATTTTCACTTCTTCACATTATCTCTCTTTATCTTCTTCCTCTTCCTCTTCACCTTCCTTGCCTCATACTAGCCATGATGACAAGAAACCTAGACTCTCACCTTCTCTATCTCTCCCTCTTTTGAATCCTCAAAGAAGTGAAGTCATGAAAAGCTATCAAGATGTGAAAAAACACAATGTTTTGATGAATAATGAGCAGAACATTACATTGGAGTTAGGTATAGGGTTGTTTAAACACCATGAAGAGAAGCTAGATTTGGAGCTTCGACTTTAA 579 0.3696 MEGNYLNRNTTTTHRDHHHHHHHHGYEEHSWGTSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSWVNSDQCPNNNNNNNNITNKPNPNDEIFTSSHYLSLSSSSSSSPSLPHTSHDDKKPRLSPSLSLPLLNPQRSEVMKSYQDVKKHNVLMNNEQNITLELGIGLFKHHEEKLDLELRL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06634 192 MobiDBLite consensus disorder prediction 78 123 - -
Vivi1g06634 192 Pfam C2H2-type zinc finger 40 64 - -
Vivi1g06634 192 MobiDBLite consensus disorder prediction 1 31 - -
Vivi1g06634 192 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Vivi1g06634 192 SMART c2h2final6 40 62 IPR013087 -
Vivi1g06634 192 SUPERFAMILY beta-beta-alpha zinc fingers 37 66 IPR036236 -
Vivi1g06634 192 PANTHER OS07G0101800 PROTEIN 21 192 - -
Vivi1g06634 192 MobiDBLite consensus disorder prediction 78 141 - -
Vivi1g06634 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06634 Vivi-Chr1 153411545 153412547 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06634 8 192 C2H2 Transcription Factor Family AT3G23130 41.538 2.07e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06634 - - vvo:131619225 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06634 1 153411545 153412547 Vivi1g06634 1 153411545 153412547 ECH