Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06620 ATGATGGGTGCCAATTTACATCAACTACTAAGAAGCCTATGTTTGGATACTGATTGGAAGTATGCTGTCTTTTGGAAGCTACAACACTGTGCTAGGATGATCTTGACATGGGAGGATGCTTACTATGACAATCTTAATAATTGTGATTCTTCCCAAAGTATGTACTGCCAGAAGAACATGGATCAGATCTGTGGCAGGAACTTTTCAAACGACCCTTTAGGATTATCTTTGGCAAAGATGTCATATCATGAATATTCCTTAGGGGAAGGAATTGTTGGACAAGTAGCTGTTAGCGGAAAACATCAATGGATCTGTGCAGATAATCAACTTACATGTTCTAGCCCATCTTTTAAGCTTGCTGAAGAATGCCAATCTCAGTTTTCTGCTGGAATTAGGACAATTGTTGTTGTAGCGGTAGTCCCACTTGGAGTTGTTCAACTCGGCTCTTCAAATAAAGTTAGTGAAGACATGGGGTTTGTCACACATATCAGAAGTCTCTTTTTGTCTACTTGTGATCAAACATTAGGTTACCTTCCAAGTCAAATCCAAAGTGTGAAACATGACACACGGAAAACCATGATGGGTGAAACACCGGATGGTTTAATGCCCTTCCAATGTCCCGGGAAGAACTACTCACCTCCTACTGTTTATCAGAAAATGACTGTTGATGCCAGGCACGGAGGGCTTGAAATTACTAGCGACCAAAGTTCCATTTTGCTTCAGTCAATGTCAAATATGATGACCGCAGAGAATCGGAAACTAGAAGGGGTGAAACCTTCAAATGAAAGGAAGTGTGAAGGGAACAATAATAGCTTCAAAGATACTAGTTTGAAATCAGACAAAAACATCTCATCGGTTTTACAAAATTCAGTTATGGATAATAATAGTGTTAGAGCCAATGTTAGAGCTGATACTGAGATGTCAATGTTTCAGACTGAGTCTTATTACGAGGATATCTCGTACACGCTGAAATTTCCTGCTGGCTATGAGCTACACGAAGCACTTGGACCAGGTTTTCTGAAAGAGAGTAAATATTTCGACTGGGCGGTACAGGGAAATCAAGATGCTGAGATGTCGGATGAGTTTAGCTGCAGCCAGTTGACTAGTGAATCTCGTCCAGAGCATCTTTTGGAAGCAGTGGTGACCAAAGTTTGCCATAGTAATAATATTGTTGATAACGAGTTATCATTTTCTACATCCGTTCAGGATGCAATGGTATCCGGAAGAAACCCTGAAGTTCCTATTCATAATGTTCGCACTATTAACTCAGAAGGCTATTCAATTGATCAGCCATCTCATGTTAAAGAGAACAAGCATAATCGTAGTTTCAGTTCATCGGGAATATGTGGTGTGATATCCCCCAAAAGCTTTTCTTCTGCGTGTCCTAGTTCGTGTAGTAACCAGTTTGAGAGATCTTCTGAACCATCTAAAAACAGCAAAAAGAGGGCTAGGCCCGGGGAGAGTTGTAGGCCTAGACCAAGGGACAGACAACTGATCCAAGACCGTATTAAGGAGTTACGAGAGCTGGTACCAAATGGAGCAAAGTGCAGTATTGATTCACTTTTGGAGTGCACAATAAAGCATATGCTCTTTCTCCAAAGTATAACTAAGCATGCTGACAAGCTAAATAAATTCTCTGAAACAAAGACAAAGTTGCATGATCACGTGGAAAAAGACATTCATGGAACCTCTGGTTATCAACAGGGTTCAAGTTGGGCAATGGAGGTAGGAGGTCATCTGAAGGTGCACTCAATATTAGTAGAAAATCTTAGCAAGAACGGGCAGATGCTTGTTGAGATGCTTTGTGAGGAGTGCAGCCATTTTCTTGAGATAGCAGAAGCCATGAGAAGCTTGGGCCTGAAAATTTTGAACGGTGCAACTAAAGCTCATGGCGAGAAGACATGCATATCTTTTGTGGTTGAGGGACAAAACAACCGAAATCTACATAGATTGGATATCCTATGGCCCCTTGTTCAATTATTGCAGTCAAAGAGCATAGTGAATGCATGA 2010 0.4104 MMGANLHQLLRSLCLDTDWKYAVFWKLQHCARMILTWEDAYYDNLNNCDSSQSMYCQKNMDQICGRNFSNDPLGLSLAKMSYHEYSLGEGIVGQVAVSGKHQWICADNQLTCSSPSFKLAEECQSQFSAGIRTIVVVAVVPLGVVQLGSSNKVSEDMGFVTHIRSLFLSTCDQTLGYLPSQIQSVKHDTRKTMMGETPDGLMPFQCPGKNYSPPTVYQKMTVDARHGGLEITSDQSSILLQSMSNMMTAENRKLEGVKPSNERKCEGNNNSFKDTSLKSDKNISSVLQNSVMDNNSVRANVRADTEMSMFQTESYYEDISYTLKFPAGYELHEALGPGFLKESKYFDWAVQGNQDAEMSDEFSCSQLTSESRPEHLLEAVVTKVCHSNNIVDNELSFSTSVQDAMVSGRNPEVPIHNVRTINSEGYSIDQPSHVKENKHNRSFSSSGICGVISPKSFSSACPSSCSNQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKFSETKTKLHDHVEKDIHGTSGYQQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAMRSLGLKILNGATKAHGEKTCISFVVEGQNNRNLHRLDILWPLVQLLQSKSIVNA 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06620 669 MobiDBLite consensus disorder prediction 256 277 - -
Vivi1g06620 669 MobiDBLite consensus disorder prediction 474 498 - -
Vivi1g06620 669 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 483 532 IPR011598 GO:0046983
Vivi1g06620 669 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 167 IPR025610 -
Vivi1g06620 669 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 240 665 IPR043561 GO:0003700|GO:0006355
Vivi1g06620 669 MobiDBLite consensus disorder prediction 468 498 - -
Vivi1g06620 669 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06620 Vivi-Chr1 152755513 152760120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06620 327 665 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 47.922 3.94e-84 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06620 - - cam:101504684 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06620 1 152755513 152760120 Vivi1g06620 1 152755513 152760120 ECH
Vivi6g03880 6 134696339 134701883 Vivi1g06620 1 152755513 152760120 PCT