Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06619 ATGACTAACAGTGAACACATATTTTGTGTGATGTATGAGAAATTCAAACCTCATATTTTGATGGTGTTTGTTCAGGTGGCTTTTGTGCTTCTCTATTTCCTAGTAGAGGCTTCATTTAATAATGGAATGAACCCTCATGTCTTCGTTACGTATCGTCATGCTGTTGGAGGCATAGTAGTGCTTCCTTTTGCTTATTTTCTTGAAAGAGAAACAAGGCCGAAGTTGACAATGACACTATTCATGTGGCTCTTTCTTCTTCCCCTATTCGGAATAAGTCTTACCCTGAACATGTTTTTCGTAAGCTTGAAATATACCACTCCTTCATTTGTAACATCAATGATCAACACAATCTCATCGCTTACATTCATATTTGCGGTTGGATTCAGGCTTGAGGCTGTTGATTTTAAGAGCCCTCGTGGGATTGCGAAAATCTTTGGAACTGTATTATCTTTGACTGGTGCTATGGTAATGATTTTATATAAAGGACATACCATACAAAGCTTAAAGGGTGCTCCGCTCCATATTGGAAGCAAAACGGCTCATAATAACTGGATTGAGGGATCAATTTTAACTGTTGGAAGCTGCATATCATGGTCTTTATGGTTCATACTGCAGGCAATCATTGTGAAGAAATATCCAGCACAACTGTCACTAACAGCGTGGGTAAATTGCATAGGTGCAGCACAATCTGCTGTCTTTACAGCGTTCCTGCAACACAAACCTAGTGTGTGGTTCATAACATCAAGGATTGAACTCTTCTGCATTTTATACGCAGGAGTTATATGTGGTGGTTTGATTATCTACATTCAAATCTGGACCACAGTAGAAAAAGGGCCAGTCTTTGTGAGTATGTTCAATCCCCTTGGAACAATATTGGTGACTGTGCTAGCATATTTTGTTTTGGGGCAACAACTTCACGTTGGCAGTATATTGGGAGTACTCATTGTTATCATGGGTCTATACTTGCTTTTATGGGGAAAAGAAAGTGATGGAGATTACAAGCCACAACAATCCTTACCGGCGGAACATGAGGAGAAAGATTGCAAGGCACGACAGATAAAGGCTTCAGTAGCATAG 1077 0.3983 MTNSEHIFCVMYEKFKPHILMVFVQVAFVLLYFLVEASFNNGMNPHVFVTYRHAVGGIVVLPFAYFLERETRPKLTMTLFMWLFLLPLFGISLTLNMFFVSLKYTTPSFVTSMINTISSLTFIFAVGFRLEAVDFKSPRGIAKIFGTVLSLTGAMVMILYKGHTIQSLKGAPLHIGSKTAHNNWIEGSILTVGSCISWSLWFILQAIIVKKYPAQLSLTAWVNCIGAAQSAVFTAFLQHKPSVWFITSRIELFCILYAGVICGGLIIYIQIWTTVEKGPVFVSMFNPLGTILVTVLAYFVLGQQLHVGSILGVLIVIMGLYLLLWGKESDGDYKPQQSLPAEHEEKDCKARQIKASVA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06619 358 PANTHER WAT1-RELATED PROTEIN 17 330 IPR030184 GO:0016020|GO:0022857
Vivi1g06619 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 327 - -
Vivi1g06619 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
Vivi1g06619 358 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020
Vivi1g06619 358 Pfam EamA-like transporter family 187 324 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06619 Vivi-Chr1 152603165 152607455 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06619 13 357 Nodulin-like Gene Family AT4G08300 34.734 6.55e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06619 - - gmx:100808275 530.406