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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi1g06561
ATGCCTGCCGGACATGGTCTCCGTTCAAGGACCAGGGACTCCTTCTCCCGTCCCTTCCGTAAGAAGGGAACAATAGCCCTTGCAACCTATCTCAGGACGTACCACATCGGTGACTACGTCGACATCAGAGTTAACGGAGCTGTTCACAAAGGTATGCCTCACAAATTCTACCACGGCCGCACCGGTCGCGTCTGGAACGTCACCAAACGTGCCATCGGCGTCGAAGTCAACAAACAGGTGAGGAACAAGATCTTGAGGAAGAGGATTCATGTTCGAGTGGAGCATGTTATGCCGTCTAGGTGCACTGAGGAGTTTCGATTGAGGAAGATTCAGAATGATAAGTTGAAGGCTGAGGCGAAGGCAAAGGGAGAGGTGATCAGCACCAAGCGCAAGCCGGAAGGGCCGAAACCTGGTTTCAAGGTGGAGGGTGCTACATTGGAGACTGTTACTCCGATACCGTATGATGTTGTTAATGATCTTAAAGGAGGGTATTAG
495
0.5131
MPAGHGLRSRTRDSFSRPFRKKGTIALATYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVRNKILRKRIHVRVEHVMPSRCTEEFRLRKIQNDKLKAEAKAKGEVISTKRKPEGPKPGFKVEGATLETVTPIPYDVVNDLKGGY
164
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi1g06561
164
ProSitePatterns
Ribosomal protein L21e signature.
37
62
IPR018259
GO:0003735|GO:0005840|GO:0006412
Vivi1g06561
164
Gene3D
-
99
156
-
-
Vivi1g06561
164
PANTHER
60S RIBOSOMAL PROTEIN L21
1
163
IPR001147
GO:0003735|GO:0005840|GO:0006412
Vivi1g06561
164
Pfam
Ribosomal protein L21e
1
101
IPR001147
GO:0003735|GO:0005840|GO:0006412
Vivi1g06561
164
SUPERFAMILY
Translation proteins SH3-like domain
3
99
IPR008991
-
Vivi1g06561
164
Gene3D
Ribosomal protein L21
1
97
IPR036948
GO:0003735|GO:0005840|GO:0006412
Vivi1g06561
164
FunFam
60S ribosomal protein L21
99
158
-
-
Vivi1g06561
164
MobiDBLite
consensus disorder prediction
121
141
-
-
Vivi1g06561
164
MobiDBLite
consensus disorder prediction
121
137
-
-
Vivi1g06561
164
FunFam
60S ribosomal protein L21
1
98
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi1g06561
Vivi-Chr1
151253870
151254653
Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi1g06561
1
164
Cytoplasmic Ribosomal Protein Gene Family
AT1G57860
80.488
7.37e-101
285
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi1g06561
K02889
-
gmx:100305629
319.316
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