Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06547 ATGACATCTACAAATATTGATTGGAAGCTGATGATTGGTATGGAATTTGATTCATCAGAGGCACCTTTTCAATTTTGGCTCGCATACGGTGCACACATTGGCTTTGGCGTTAGAAAACGTTACGTGAACAAGAATAAAAAAACAGGTTCTATATCATCATGCCGATTTGTTTGTTGCAAGGAAGGACTACGACAAGCAGACAAGAGAGATGTGTTTGTTAGTAACCATAGAGCTGAAACAAGAACTGATTGCAAAGCAAGGATTTCTACTGTATTGAAGAATGAAAAATTTGTTATTCATGAATTCATAGAGGGTCATAATCACTCTTTGCAACAACCAGAGACCACACACATGCTAGCATCACATAGAAAGATAACTGAGGTCCAAGCATATGAAATTGATTTTGCTGATAACTACGGATTACGACAGAAGTCGACATTTCAACTTATGTGCACACAGGCGGGACATAGTTCTAATCTTGGATATACACGTTTGGATATAAAAAATTATCTCAATGAAAGAAGATAA 528 0.3674 MTSTNIDWKLMIGMEFDSSEAPFQFWLAYGAHIGFGVRKRYVNKNKKTGSISSCRFVCCKEGLRQADKRDVFVSNHRAETRTDCKARISTVLKNEKFVIHEFIEGHNHSLQQPETTHMLASHRKITEVQAYEIDFADNYGLRQKSTFQLMCTQAGHSSNLGYTRLDIKNYLNERR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06547 175 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 162 - -
Vivi1g06547 175 Pfam FAR1 DNA-binding domain 24 111 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06547 Vivi-Chr1 150483270 150483797 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi1g06547 FAR1 1.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06547 - - vvo:131625860 328.946