Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06530 ATGATAGCTATTGGTACCATGAATATTTTTGGTTCACTAACCTCTTGCTACCCCACAACAGGCCCGTTTTCGCGTTTCGCTGTGAATTACAATGATGGTTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCTTTGTTCCATTACACTCCTCTAGTGGTGTTATCCGCCATAATCGTATCTGCAATTCTTGGACTCATAGATTATCAAGCCGCAATCCATTTGTGGAAAATCGATAAATTTGATTTTCTAGTATGTTTCAGTGCATATGTTGGAGTTTTCTTTGGCAATGTCGAAATTGGCTTAGTACTAGCAGTTACATTATCTATACTTAGAGTACTTTTATTTGTGGCAAGGCCTAGAACATTTGTGTTAGGAAACATTCCAAATTCATCAGCATACATAAATGTAGAACATTATTCAAATGCACATCATGTTCATGGAATACTAATTCTTGAAATTGATGCGCCGATTTACTTTGCGAATGCAAGCTATTTAAGAGAGAGGATTACAAGGTGGATTGATGAAGAGGAAGAGAAATTCAAAGGTGCGGGAAGTACTAGTTTGCAGTACGTTATAGTGGATATGACAGGTAAAATCGTGATTAAAAAGTGA 648 0.3657 MIAIGTMNIFGSLTSCYPTTGPFSRFAVNYNDGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAILGLIDYQAAIHLWKIDKFDFLVCFSAYVGVFFGNVEIGLVLAVTLSILRVLLFVARPRTFVLGNIPNSSAYINVEHYSNAHHVHGILILEIDAPIYFANASYLRERITRWIDEEEEKFKGAGSTSLQYVIVDMTGKIVIKK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06530 215 Gene3D STAS domain 130 212 IPR036513 -
Vivi1g06530 215 Pfam Sulfate permease family 1 99 IPR011547 GO:0016020
Vivi1g06530 215 Pfam STAS domain 151 209 IPR002645 -
Vivi1g06530 215 SUPERFAMILY SpoIIaa-like 154 209 IPR036513 -
Vivi1g06530 215 ProSiteProfiles STAS domain profile. 150 215 IPR002645 -
Vivi1g06530 215 PANTHER SULFATE TRANSPORTER 1 209 IPR001902 GO:0016020|GO:0055085
Vivi1g06530 215 CDD STAS_SulP_like_sulfate_transporter 151 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06530 Vivi-Chr1 149207335 149208913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06530 1 209 Inorganic Solute Cotransporters AT4G02700 65.550 7.60e-96 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06530 K17471 - vvo:131618945 426.402