Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06529 ATGATAGCTATTGGTACCATGAATATTTTTGGTTCACTAACCTCTTGCTACCCCACAACAGGCCCGTTTTCGCGTTTCGCTGTGAATTACAATGATGGTTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCTTTGTTCCATTACACTCCTCTAGTGGTGTTATCCGCCATAATCGTATCTGCAATTCTTGGACTCATAGATTATCAAGCCGCAATCCATTTGTGGAAAATCGATAAATTTGATTTTCTAGTATGTTTCAGTGCATATGTTGGAGTTTTCTTTGGCAATGTCGAAATTGGCTTAGTACTAGCAGTTACATTATCTATACTTAGAGTACTTTTATTTGTGGCAAGGCCTAGAACATTTGTGTTAGGAAACATTCCAAATTCATCAGCATACATAAATGTAGAACATTATTCAAATGCACATCATGTTCATGGAATACTAATTCTTGAAATTGATGCGCCGATTTACTTTGCGAATGCAAGCTATTTAAGAGAGAGGATTACAAGGTGGATTGATGAAGAGGAAGAGAAATTCAAAGGTGCGGGAAGTACTAGTTTGCAGTACGTTATAGTGGATATGACAGTGGAATAA 633 0.3681 MIAIGTMNIFGSLTSCYPTTGPFSRFAVNYNDGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAILGLIDYQAAIHLWKIDKFDFLVCFSAYVGVFFGNVEIGLVLAVTLSILRVLLFVARPRTFVLGNIPNSSAYINVEHYSNAHHVHGILILEIDAPIYFANASYLRERITRWIDEEEEKFKGAGSTSLQYVIVDMTVE 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06529 210 Pfam STAS domain 151 208 IPR002645 -
Vivi1g06529 210 CDD STAS_SulP_like_sulfate_transporter 151 208 - -
Vivi1g06529 210 PANTHER SULFATE TRANSPORTER 1 208 IPR001902 GO:0016020|GO:0055085
Vivi1g06529 210 Gene3D STAS domain 130 209 IPR036513 -
Vivi1g06529 210 ProSiteProfiles STAS domain profile. 150 210 IPR002645 -
Vivi1g06529 210 Pfam Sulfate permease family 1 99 IPR011547 GO:0016020
Vivi1g06529 210 SUPERFAMILY SpoIIaa-like 154 189 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06529 Vivi-Chr1 149207334 149208913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06529 1 208 Inorganic Solute Cotransporters AT4G02700 65.865 5.50e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06529 K17471 - vvo:131618945 413.69