Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06527 ATGTTGCATGGAATCCTCTGTCCGATTTTCATATTTTGGCAGTCTCTACGCCCGTTTTCGCGTTTCGCTGTGAATTACAATGATGGTTGCAAAACTGCAGCATCAAACATTGTAATGTCAATAGCAGTGATGTTGACATTATTATTCCTAACACCTTTGTTCCATTACACTCCTCTAGTGGTGTTATCCGCCATAATCGTATCTGCAATTCTTGGACTCATAGATTATCAAGCCGCAATCCATTTGTGGAAAATCGATAAATTTGATTTTCTAGTATGTTTCAGTGCATATGTTGGAGTTTTCTTTGGCAATGTCGAAATTGGCTTAGTACTAGCAGTTACATTATCTATACTTAGAGTACTTTTATTTGTGGCAAGGCCTAGAACATTTGTGTTAGGAAACATTCCAAATTCATCAGCATACATAAATGTAGAACATTATTCAAATGCACATCATGTTCATGGAATACTAATTCTTGAAATTGATGCGCCGATTTACTTTGCGAATGCAAGCTATTTAAGAGAGAGGATTACAAGGTGGATTGATGAAGAGGAAGAGAAATTCAAAGGTGCGGGAAGTACTAGTTTGCAGTACGTTATAGTGGATATGACAGGTAAAATCGTGATTAAAAAGTGA 636 0.3664 MLHGILCPIFIFWQSLRPFSRFAVNYNDGCKTAASNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAILGLIDYQAAIHLWKIDKFDFLVCFSAYVGVFFGNVEIGLVLAVTLSILRVLLFVARPRTFVLGNIPNSSAYINVEHYSNAHHVHGILILEIDAPIYFANASYLRERITRWIDEEEEKFKGAGSTSLQYVIVDMTGKIVIKK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06527 211 Pfam Sulfate permease family 4 95 IPR011547 GO:0016020
Vivi1g06527 211 Pfam STAS domain 147 205 IPR002645 -
Vivi1g06527 211 CDD STAS_SulP_like_sulfate_transporter 147 205 - -
Vivi1g06527 211 SUPERFAMILY SpoIIaa-like 150 205 IPR036513 -
Vivi1g06527 211 Gene3D STAS domain 126 208 IPR036513 -
Vivi1g06527 211 ProSiteProfiles STAS domain profile. 146 211 IPR002645 -
Vivi1g06527 211 PANTHER SULFATE TRANSPORTER 17 205 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06527 Vivi-Chr1 149206376 149208913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06527 18 204 Inorganic Solute Cotransporters AT4G02700 65.241 4.84e-84 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06527 K17471 - vvo:131618945 383.645