Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06484 ATGGCTAGGCCTGTCGAAAGAATAGCAGAGATCAACTATGGAAAAGAGCTTTGGAAGATTGCTGTTAGGATTCACCACAAATGGAATGTTGTGTCTAACAACAAGGAACATTTTGAAATGATCTTTATTGACAAATTGGGTGATGATATTCATGCTGGTGTTCCAACACCGCATGTGTCGGTGTTCAACGAAAAAAGCCTATTAGGGCATACCTATACTGTATCAAATTTTAAGGTAGTGCCTTATGTTTTGGCCTTCAAGGCATCAGTACACAAATATATGGTAAAGTTTACTGCTGGAACATCTGTCATTGATGAAGACAAACATGAGATACTCCCGAAACCGACTGTGTTTACAAGTTTTTCAGACATCATAACAGGGAAGTTTGTCAAAGATGTCTTGCTTGATGTCATTGGAATGGTCGATAGTATTGGTTATGCACAGACTGAGTCTGGTGCAAAGAAACAACAAATTAGCATGGTGTTGCGTGACCACATCAACAACATGTTGAACTGTACTTTATGGGAATCATATGCGGACCAGTTCATCAGGTTTAACAAAGATAGGGTTGATGCATCAGTTCCTACAATTGTGTTGCTTCAGTATGCCAAAGTGAAAGAAGAAGGAAAGTATCCTCTGTTCGTGACAAACACCTACAATGTGACCCTTTTATGTGTTGATGCTGATTTCCCTATCATGAAAGACTCTATAGAAAGGTAA 720 0.3903 MARPVERIAEINYGKELWKIAVRIHHKWNVVSNNKEHFEMIFIDKLGDDIHAGVPTPHVSVFNEKSLLGHTYTVSNFKVVPYVLAFKASVHKYMVKFTAGTSVIDEDKHEILPKPTVFTSFSDIITGKFVKDVLLDVIGMVDSIGYAQTESGAKKQQISMVLRDHINNMLNCTLWESYADQFIRFNKDRVDASVPTIVLLQYAKVKEEGKYPLFVTNTYNVTLLCVDADFPIMKDSIER 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06484 239 CDD RPA1_DBD_B_like 136 231 - -
Vivi1g06484 239 Gene3D - 114 239 IPR012340 -
Vivi1g06484 239 Gene3D - 2 105 IPR012340 -
Vivi1g06484 239 SUPERFAMILY Nucleic acid-binding proteins 118 232 IPR012340 -
Vivi1g06484 239 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
Vivi1g06484 239 CDD RPA1_DBD_A_like 19 103 - -
Vivi1g06484 239 SUPERFAMILY Nucleic acid-binding proteins 7 104 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06484 Vivi-Chr1 147331003 147332076 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06484 8 231 Core DNA Replication Machinery Family AT2G06510 23.305 3.03e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06484 - - vvo:131613993 415.616