Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06479 ATGACGAAGACGGCAAGTATAGAGATGGTCACTGATGAGAATCTTGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTCCTTCAAATCTTTGACCGGAATCATATTCTCTCCGGCAAACGCATCTACTCCGCTAAAAGACTCCCGCCGCCATCGCCGGAAACACCACGGAAAGACAGTGGATGTGTCACACCGACGCTATCAGCAACACCGTCTCCTGTTAAAGAGGTCCAATGCCTAGCGAAACCAAAACCAGTCCTCCCTGTTTTGGAACTCAAGGAAGGTACAAGATCTTCATGGAAATTCTCTAGAGAAGCTCCTAGACTCTCCCTCGATAGCCGAGCGGTGGTTGATGCCAAAGGAGCGCTTCACCCGAGAGAGATCCGAACAAACGCAACGGTAAACCCCGAAAACGACGGCGACAAACAGCGTCGTTCCACCAGCAGTGTAATCGTCAGGCTCATGGGTCTTGACTCGTTACCAACGGATTCCGTTGCAAAGTTACAAAGATCCGCTTCCGAGTCCAGAGTTTCCAGAGATCGGTCCAATAGTTACACTCAACGGAGTAATGCCGGCCCGGGGTTGAACCAGATGAATAATCATAATCATATTCATAATCATAATAAAACTAATTCTAATGTTGTTAATGTTCATGCTAATAAAAATGCTAATGTTATTAATTCTTATTCTTATGGAGCAATCGATGATAACCGGTTGTGGAATGGTAGAGTTGCAGAGGGAGGTAGAGGGAAACAGAATCAGAATAAGGGAACAGTAATGGTACAAAAGAAGAGTTTCTACGATGCTGCAGATTTCTTCCCTGAACCGAAGCACAATGTTTCGATCTCTGAAGAGATAGAGAAAAGGCTTAAGATGCGTGGGATTAATCAACCTTCTCAAGATCTCGACACTCTGAAACACATCTTAGAAGCTATGCAGCTTAAAGGTCTTCTTCATTCCTACAAATCAAACCAATCTCCCATTGTGTTAATGAAACCACTCAGATCTTCTCGGGTTGAGCGAGGCGAGCGATTCGAACGGTTCAATCGGACAGGTTATGATTCTCCACCTCCGCATTCTTCTGTTCGGTCCAATTCGCCAGCTCGCCGGAACTTAAGTCCGAGACTTTCCGGCGAGAATGACCGGGCTCAAGTTAGTTCGAGAAACTCGAGCCCGAATCGGAGGAATGCGAATGTCCCGAACATGGAGACGCGGAGGAGAGTTAGTAATGAAGGTGTTGATTCTAGAAGAGTGTCTCCCGTTCATTCACCTAAGATAAGTTCCAGAAGAAATGCAACTGCTCCGATAGTGACAGGTGGATCACCCAGAATGAAAAAAGTGATTGATCCTAAGGTGAAAATGTTAAGCTTAGCAGATGATGAATGGTCCACAGTTTCAGATAATAGTTTCACCACTTCAAATTCTCATACCGATTCAGAGAGGTATAAATTGGAAGAGTACAAAGAAGGGAGGAATCTACTTGACAGATGCGACAAATTGCTTAACAGTATAGCGGAGATAACTGCATCTAACGAGTTACAACCGAGTCCTGTTTCAGTTCTTGACCCGTCTGTTTACAAGGACGAGTGGTGTTCACCTTCACCAATTACCAAAAGAAACATTGATTACAGTTTCAAAGATCAAGTGGCGGAATTTGAAGATGAAATGTGGAGTGGAGGAGAAGGAAAATCCGAGGAGGAATCGAAATCAGAGGATTGTGATTTCATTTATTTTTCTAAGATTCTGCGTGCTTGTAGTTATTATCCAGAAGATTGCGACATTTTTGTTTTACTTGAAAAGCAACTATTTCTGAAGGGAAAGGATACTTCAAAGACTTCTACATTGCAGAGGCGGTTAATTTTCGACACGCTGCAGGAAATAATTAATCGGAACCAAAGGTTACCGCCGTGGAAGGCGGTGTGTCAGGGAGAGGAAACACAAGAGATTTGGTCGGAGTTTCTGAAGATACGAGATAGGGACGAATCGGAATCGTCGGAGGACTTGTTTGGAGTGATATGTGGTGTTTTAAAGAAGGACATGGCGGAGGAGGTGAGTGGTTGGGGCGAATGGACGGTGGAGATTGGAGAGTTGGTTTTGGGCGTGGAACGGATGGTATTCAAAGATTTAATTGATGAGACTATACAACATCTTGCTTCATTTGCACCACAATGTAACAAACTAGGGGCGCTTCGTAGGCAACTTGTATTTTGA 2217 0.442 MTKTASIEMVTDENLEKHIHKHMGCMAGFLQIFDRNHILSGKRIYSAKRLPPPSPETPRKDSGCVTPTLSATPSPVKEVQCLAKPKPVLPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNATVNPENDGDKQRRSTSSVIVRLMGLDSLPTDSVAKLQRSASESRVSRDRSNSYTQRSNAGPGLNQMNNHNHIHNHNKTNSNVVNVHANKNANVINSYSYGAIDDNRLWNGRVAEGGRGKQNQNKGTVMVQKKSFYDAADFFPEPKHNVSISEEIEKRLKMRGINQPSQDLDTLKHILEAMQLKGLLHSYKSNQSPIVLMKPLRSSRVERGERFERFNRTGYDSPPPHSSVRSNSPARRNLSPRLSGENDRAQVSSRNSSPNRRNANVPNMETRRRVSNEGVDSRRVSPVHSPKISSRRNATAPIVTGGSPRMKKVIDPKVKMLSLADDEWSTVSDNSFTTSNSHTDSERYKLEEYKEGRNLLDRCDKLLNSIAEITASNELQPSPVSVLDPSVYKDEWCSPSPITKRNIDYSFKDQVAEFEDEMWSGGEGKSEEESKSEDCDFIYFSKILRACSYYPEDCDIFVLLEKQLFLKGKDTSKTSTLQRRLIFDTLQEIINRNQRLPPWKAVCQGEETQEIWSEFLKIRDRDESESSEDLFGVICGVLKKDMAEEVSGWGEWTVEIGELVLGVERMVFKDLIDETIQHLASFAPQCNKLGALRRQLVF 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06479 738 MobiDBLite consensus disorder prediction 167 200 - -
Vivi1g06479 738 MobiDBLite consensus disorder prediction 423 437 - -
Vivi1g06479 738 MobiDBLite consensus disorder prediction 349 444 - -
Vivi1g06479 738 PANTHER LONGIFOLIA PROTEIN 11 58 IPR033334 GO:0051513
Vivi1g06479 738 MobiDBLite consensus disorder prediction 47 70 - -
Vivi1g06479 738 Pfam Domain of unknown function (DUF4378) 577 714 IPR025486 -
Vivi1g06479 738 MobiDBLite consensus disorder prediction 356 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06479 Vivi-Chr1 146938537 146941476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06479 102 738 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 35.826 4.82e-89 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06479 - - vvo:131644441 1428.31