Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06464 ATGATTAGAAGGATTTCTTCGAATTACCTTTTCTTTGCGTTAGGGTTTCTGCTTTCCACCGGAATCCCCTTCGCTGACGGTGAATCATCTACATGCTTGACGGTTTACAAAAACGGCGGTGCTCCGGCGGTGTTCCAATCCCCGAAATGCCCCCGCTGGAGACTCTTCGATTACGATTCTCCTCGTCAAACTACAACTCGTTGTCAGTCGTCGATGCTCCAGGGTCGAAGAAAATCACAAGAGGATCGCACACTCTGTGTCCTCGATGTTCGCATTCCATTCCCCGGTCCGATGGGGATCAGGGAGGTTGTAGTTGGAATTGTGGCGGTTTTCGACGGCCATAACGGTGCTGAAGCTAGTGAGATGGCGTCGAAGCTTTTGATGGAGTATTTTGTTCTGCATACTTATTTTCTTCTTGATGCCATGTATTCTGTTGTATCAAAGACTTCGACAGGAACATTGCTTCACAGGAGAGACAGTGATCACGTAAACTTATTGCATAGATGGAAAGAGATTTTAGGTTGGCAATGGCATGAACAGCATTCGGAAAGGTTGCGGAATGTATTTTCTGCTAACTTTGATGATTCTTTTCACTTGGAAATTTTAAAGGAAGCATTGTTGAGAGCAATCCATGATATTGATGCAAAGTTTTCTGAGGAAGCCTCTAGAAATAACCTTCACTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAATTTTTGGTTGCCAATATTGGAGACTCTAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCCCCTAAGGAGGCTAAAGACTCCCTATTAAAGCTATATAGACAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCTTCCCACGGGCTCGCTCATTTTGCAGTGAAGGAGTTGACTAGCGATCATCATCCAGACAGAGAGGATGAAAGAACTCGGGTGGAAGCTGCTGGTGGTCGAGTTCTGAATTGGGGTGGTTTGCCTCGCGTAAATGGTCAGTTGGCCATTACACGAGCTATTGGTGATGTGTTATTTAAAAGTTATGGAGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAATGATAGCTACTTGGTGGCTGCATCTGATGGTGTCTTTGAGAAGTTGAGCGTACAAAATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTTAGGGACATGAGATCAGAGTGCACCTCTTCATCTTCCTATTCATTAGCAGATTTAATTATTGATGCTGCCTTTGAAAAGGGCAGTATGGACAATATTGCAGCAGTTGTTGTTCCTCTGGAATCGGCCAACTTTTCTGAGAACTCGCTTAGAAGAAGCTACACTGAAAATGGTGATACAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCTGTTAATGATATCACCTCCCATCTATTGCACCCGGAGCACACTCGTCAGCTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTAGCGGAAAATCTTGATGATTCAGTGGAATCTAAATGGCCGGCTAAAAAAGATGATTGGGAAGATTATTTGTATGAACTACCCCAGCCTCTACCAAACAACCTTCATCAACAAACTGAAGTAGACGGCCCTATAATTTTGTACAGCGACCAAAACTTCTGCTTTTACCTGAGCTCTAATATCAATGAACCCAAAGACCAGTGCATAAATCCAGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGGATCAATTCCTTTACATGATACAGGTTCTGATGATGGTTCTTCTGACTACTCAATGCCGGATTCAAGGTATATACTTAGGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATGAAGGTAACATTACTGCAGAAACGAGCAAGGGTGACAATAACAGAAACAGAAGCTCAAGTAATCCTGAATGTCAGGATGGTTCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAATACTTCGGCGAAATTTTCTTAAATGCCTCTATGTGCTTTGAAGATGTGCTAATGGGTGGAAAATCAAACTGTGTATTTGAAACATCACAATATGGTTCTGAGTATTCATTTCAAAACAAATTTCAACTGCAAGGTGCCTTATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAGCTTTTATACACTATAGAAGATGCAAACAATACAGCTGAGAAAGAAAGACTTGAGCAAGTGAAACAAGTTCAGATACTACACCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAAGAAATGCGCAACCTTATCTGGCAGCTGTTGTTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGGGACGTTAAACCTGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGAGGCTCCAACCAAACTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGACGAATTCACAATAAAGCATTTGTATGCTTCTACTGGGCCTTCAAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGTCAACAAGCTCAAATTTGAAGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCCAATATTTTCCAGATAAATGCTTTTACACGTGCTCTTTTGGACCGCCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAATTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGTCACTCAAAAAAGTATCACAAAGCGAATCAAGTAGGAGTTTCGCCTGCATCCTGGAAATGTTCTGAAGAGTTCTTTTCTAGACAAATTAAAGCTAGAGATCCTCTTAAAATAGGTTTTTCAAACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTACAATGGGACCCGGAGGATCGGCCAAGTGTTGATGAGGCACTACGGCATCCCTATTTCCAACCTCCGCCGAGAGGATGA 3225 0.4217 MIRRISSNYLFFALGFLLSTGIPFADGESSTCLTVYKNGGAPAVFQSPKCPRWRLFDYDSPRQTTTRCQSSMLQGRRKSQEDRTLCVLDVRIPFPGPMGIREVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAMYSVVSKTSTGTLLHRRDSDHVNLLHRWKEILGWQWHEQHSERLRNVFSANFDDSFHLEILKEALLRAIHDIDAKFSEEASRNNLHSGSTATVVLVADDKFLVANIGDSKAFLCSENFQSPKEAKDSLLKLYRQTERDGSVSVWDREKYRLASSHGLAHFAVKELTSDHHPDREDERTRVEAAGGRVLNWGGLPRVNGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSYLVAASDGVFEKLSVQNVCDLLWEVHRFRDMRSECTSSSSYSLADLIIDAAFEKGSMDNIAAVVVPLESANFSENSLRRSYTENGDTGFPLFGLQESAYRSSVNDITSHLLHPEHTRQLDTKFKRILVEVKHGDFGCFYLAENLDDSVESKWPAKKDDWEDYLYELPQPLPNNLHQQTEVDGPIILYSDQNFCFYLSSNINEPKDQCINPEGFASFIGLLGSIPLHDTGSDDGSSDYSMPDSRYILRRSFGRGSYGEVWLAFHWNCNEGNITAETSKGDNNRNRSSSNPECQDGSSNYTLYILKRIMVEKGSAVYLSGLREKYFGEIFLNASMCFEDVLMGGKSNCVFETSQYGSEYSFQNKFQLQGALYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTIEDANNTAEKERLEQVKQVQILHPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDVKPENMVICFEDPESGRCLKEAPTKLNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGSTSSNLKYDMWSVGVVMLEMVLGTPNIFQINAFTRALLDRHLEGWNEGVKELAYKFRSFMELCILIPGVSGSHSKKYHKANQVGVSPASWKCSEEFFSRQIKARDPLKIGFSNIWALRLVRHLLQWDPEDRPSVDEALRHPYFQPPPRG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06464 1074 SUPERFAMILY Protein kinase-like (PK-like) 614 1070 IPR011009 -
Vivi1g06464 1074 Gene3D - 62 448 IPR036457 -
Vivi1g06464 1074 PANTHER PROTEIN PHOSPHATASE 67 440 IPR015655 GO:0004722|GO:0006470
Vivi1g06464 1074 SUPERFAMILY PP2C-like 64 442 IPR036457 -
Vivi1g06464 1074 Pfam Protein kinase domain 810 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06464 1074 FunFam uncharacterized protein LOC106771884 isoform X8 808 1069 - -
Vivi1g06464 1074 Pfam Protein phosphatase 2C 175 434 IPR001932 -
Vivi1g06464 1074 SMART serkin_6 618 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06464 1074 SMART PP2C_4 59 439 IPR001932 -
Vivi1g06464 1074 Gene3D Transferase(Phosphotransferase) domain 1 806 1069 - -
Vivi1g06464 1074 MobiDBLite consensus disorder prediction 647 666 - -
Vivi1g06464 1074 CDD PP2Cc 74 441 IPR001932 -
Vivi1g06464 1074 ProSiteProfiles PPM-type phosphatase domain profile. 67 441 IPR001932 -
Vivi1g06464 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Vivi1g06464 1074 ProSiteProfiles Protein kinase domain profile. 618 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06464 Vivi-Chr1 146446607 146460829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06464 682 1072 PP2C-type Phosphatase Gene Family AT3G63340 65.473 1.04e-177 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Vivi1g06464 Pkinase 5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06464 - - gmx:100781476 1789.62