Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06463 ATGATTAGAAGGATTTCTTCGAATTACCTTTTCTTTGCGTTAGGGTTTCTGCTTTCCACCGGAATCCCCTTCGCTGACGGTGAATCATCTACATGCTTGACGGTTTACAAAAACGGCGGTGCTCCGGCGGTGTTCCAATCCCCGAAATGCCCCCGCTGGAGACTCTTCGATTACGATTCTCCTCGTCAAACTACAACTCGTTGTCAGTCGTCGATGCTCCAGGGTCGAAGAAAATCACAAGAGGATCGCACACTCTGTGTCCTCGATGTTCGCATTCCATTCCCCGCAGGTCCGATGGGGATCAGGGAGGTTGTAGTTGGAATTGTGGCGGTTTTCGACGGCCATAACGGTGCTGAAGCTAGTGAGATGGCGTCGAAGCTTTTGATGGAGTATTTTGTTCTGCATACTTATTTTCTTCTTGATGCCATGTATTCTGTTGTATCAAAGACTTCGACAGGAACATTGCTTCACAGGAGAGACAGTGATCACGTAAACTTATTGCATAGATGGAAAGAGATTTTAGGTTGGCAATGGCATGAACAGCATTCGGAAAGGTTGCGGAATGTATTTTCTGCTAACTTTGATGATTCTTTTCACTTGGAAATTTTAAAGGAAGCATTGTTGAGAGCAATCCATGATATTGATGCAAAGTTTTCTGAGGAAGCCTCTAGAAATAACCTTCACTCAGGATCTACAGCAACAGTTGTATTGGTTGCAGATGATAAATTTTTGGTTGCCAATATTGGAGACTCTAAGGCTTTCTTGTGCTCTGAAAATTTTCAGTCCCCTAAGGAGGCTAAAGACTCCCTATTAAAGCTATATAGACAGACAGAGCGTGATGGTTCTGTTTCTGTGTGGGATCGTGAAAAGTACAGATTAGCTTCTTCCCACGGGCTCGCTCATTTTGCAGTGAAGGAGTTGACTAGCGATCATCATCCAGACAGAGAGGATGAAAGAACTCGGGTGGAAGCTGCTGGTGGTCGAGTTCTGAATTGGGGTGGTTTGCCTCGCGTAAATGGTCAGTTGGCCATTACACGAGCTATTGGTGATGTGTTATTTAAAAGTTATGGAGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCTCTAACTGCTAATGATAGCTACTTGGTGGCTGCATCTGATGGTGTCTTTGAGAAGTTGAGCGTACAAAATGTCTGTGATTTGTTGTGGGAAGTACACCGTTTTAGGGACATGAGATCAGAGTGCACCTCTTCATCTTCCTATTCATTAGCAGATTTAATTATTGATGCTGCCTTTGAAAAGGGCAGTATGGACAATATTGCAGCAGTTGTTGTTCCTCTGGAATCGGCCAACTTTTCTGAGAACTCGCTTAGAAGAAGCTACACTGAAAATGGTGATACAGGTTTCCCATTATTTGGTCTGCAGGAATCTGCTTACAGAAGCTCTGTTAATGATATCACCTCCCATCTATTGCACCCGGAGCACACTCGTCAGCTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTAGCGGAAAATCTTGATGATTCAGTGGAATCTAAATGGCCGGCTAAAAAAGATGATTGGGAAGATTATTTGTATGAACTACCCCAGCCTCTACCAAACAACCTTCATCAACAAACTGAAGTAGACGGCCCTATAATTTTGTACAGCGACCAAAACTTCTGCTTTTACCTGAGCTCTAATATCAATGAACCCAAAGACCAGTGCATAAATCCAGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGGATCAATTCCTTTACATGATACAGGTTCTGATGATGGTTCTTCTGACTACTCAATGCCGGATTCAAGGTATATACTTAGGAGGAGTTTTGGTCGTGGATCATATGGTGAAGTATGGTTGGCTTTTCATTGGAATTGTAATGAAGGTAACATTACTGCAGAAACGAGCAAGGGTGACAATAACAGAAACAGAAGCTCAAGTAATCCTGAATGTCAGGATGGTTCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGTCTGCTGTGTACTTAAGTGGGCTGAGGGAAAAATACTTCGGCGAAATTTTCTTAAATGCCTCTATGTGCTTTGAAGATGTGCTAATGGGTGGAAAATCAAACTGTGTATTTGAAACATCACAATATGGTTCTGAGTATTCATTTCAAAACAAATTTCAACTGCAAGGTGCCTTATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCGGTCCAATGAAATATGGCTTGTATTCAGTTATGAAGGAGTGTCATTGTCAAAGCTTTTATACACTATAGAAGATGCAAACAATACAGCTGAGAAAGAAAGACTTGAGCAAGTGAAACAAGTTCAGATACTACACCCATCAAAGTGGTGGCGTTGGTTGAAAACAACAGAAGAAGGGCAAGAAGAAATGCGCAACCTTATCTGGCAGCTGTTGTTGGCACTCAAGTCTTGTCACGACCGCAATATCACACACAGGGACGTTAAACCTGAGAATATGGTGATATGCTTTGAAGATCCAGAGTCAGGGAGATGCTTGAAAGAGGCTCCAACCAAACTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGACGAATTCACAATAAAGCATTTGTATGCTTCTACTGGGCCTTCAAGAGCTGAACAAACTTACGAGTACACACCTCCTGAAGCTTTACTAAATGCTACATGGTATCAAGGGTCAACAAGCTCAAATTTGAAGTATGACATGTGGAGTGTTGGTGTTGTGATGTTAGAGATGGTCTTAGGGACACCCAATATTTTCCAGATAAATGCTTTTACACGTGCTCTTTTGGACCGCCATCTTGAGGGCTGGAATGAGGGTGTGAAGGAGCTGGCATACAAATTTAGATCGTTCATGGAATTGTGCATCTTAATCCCTGGGGTTTCTGGCAGTCACTCAAAAAAGTATCACAAAGCGAATCAAGTAGGAGTTTCGCCTGCATCCTGGAAATGTTCTGAAGAGTTCTTTTCTAGACAAATTAAAGCTAGAGATCCTCTTAAAATAGGTTTTTCAAACATCTGGGCTTTACGGTTAGTGCGCCATCTGCTACAATGGGACCCGGAGGATCGGCCAAGTGTTGATGAGGCACTACGGCATCCCTATTTCCAACCTCCGCCGAGAGGATGA 3228 0.4219 MIRRISSNYLFFALGFLLSTGIPFADGESSTCLTVYKNGGAPAVFQSPKCPRWRLFDYDSPRQTTTRCQSSMLQGRRKSQEDRTLCVLDVRIPFPAGPMGIREVVVGIVAVFDGHNGAEASEMASKLLMEYFVLHTYFLLDAMYSVVSKTSTGTLLHRRDSDHVNLLHRWKEILGWQWHEQHSERLRNVFSANFDDSFHLEILKEALLRAIHDIDAKFSEEASRNNLHSGSTATVVLVADDKFLVANIGDSKAFLCSENFQSPKEAKDSLLKLYRQTERDGSVSVWDREKYRLASSHGLAHFAVKELTSDHHPDREDERTRVEAAGGRVLNWGGLPRVNGQLAITRAIGDVLFKSYGVISAPEVTDWQPLTANDSYLVAASDGVFEKLSVQNVCDLLWEVHRFRDMRSECTSSSSYSLADLIIDAAFEKGSMDNIAAVVVPLESANFSENSLRRSYTENGDTGFPLFGLQESAYRSSVNDITSHLLHPEHTRQLDTKFKRILVEVKHGDFGCFYLAENLDDSVESKWPAKKDDWEDYLYELPQPLPNNLHQQTEVDGPIILYSDQNFCFYLSSNINEPKDQCINPEGFASFIGLLGSIPLHDTGSDDGSSDYSMPDSRYILRRSFGRGSYGEVWLAFHWNCNEGNITAETSKGDNNRNRSSSNPECQDGSSNYTLYILKRIMVEKGSAVYLSGLREKYFGEIFLNASMCFEDVLMGGKSNCVFETSQYGSEYSFQNKFQLQGALYEEGLNHIARYVESFESRSNEIWLVFSYEGVSLSKLLYTIEDANNTAEKERLEQVKQVQILHPSKWWRWLKTTEEGQEEMRNLIWQLLLALKSCHDRNITHRDVKPENMVICFEDPESGRCLKEAPTKLNNFSTKMRIIDFGSGIDEFTIKHLYASTGPSRAEQTYEYTPPEALLNATWYQGSTSSNLKYDMWSVGVVMLEMVLGTPNIFQINAFTRALLDRHLEGWNEGVKELAYKFRSFMELCILIPGVSGSHSKKYHKANQVGVSPASWKCSEEFFSRQIKARDPLKIGFSNIWALRLVRHLLQWDPEDRPSVDEALRHPYFQPPPRG 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06463 1075 Pfam Protein kinase domain 811 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06463 1075 MobiDBLite consensus disorder prediction 648 667 - -
Vivi1g06463 1075 SMART serkin_6 619 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06463 1075 Pfam Protein phosphatase 2C 177 435 IPR001932 -
Vivi1g06463 1075 ProSiteProfiles PPM-type phosphatase domain profile. 67 442 IPR001932 -
Vivi1g06463 1075 SUPERFAMILY PP2C-like 64 443 IPR036457 -
Vivi1g06463 1075 Gene3D - 62 449 IPR036457 -
Vivi1g06463 1075 SMART PP2C_4 59 440 IPR001932 -
Vivi1g06463 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Vivi1g06463 1075 PANTHER PROTEIN PHOSPHATASE 67 441 IPR015655 GO:0004722|GO:0006470
Vivi1g06463 1075 CDD PP2Cc 74 442 IPR001932 -
Vivi1g06463 1075 SUPERFAMILY Protein kinase-like (PK-like) 615 1071 IPR011009 -
Vivi1g06463 1075 ProSiteProfiles Protein kinase domain profile. 619 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g06463 1075 Gene3D Transferase(Phosphotransferase) domain 1 807 1070 - -
Vivi1g06463 1075 FunFam uncharacterized protein LOC106771884 isoform X8 809 1070 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06463 Vivi-Chr1 146446606 146460829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06463 683 1073 PP2C-type Phosphatase Gene Family AT3G63340 65.473 1.14e-177 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Vivi1g06463 Pkinase 5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06463 - - gmx:100781476 1785