Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06453 ATGGGTAACGTGGACTATGATTACCCTCGTTCAGGTATGAACATGAACAACGTTGGTGAGAACCATGTTCAACACCGTGTGGAAATTCCACCTCCACAACCATTTTTGAAGTCTATGAAATATGCAATGAAAGAGACTTTCTTTCCAGATGATCCATTGAGAAAGTTTAAGAATCAACCAGCTTCAAGAAAGTTGGTGCTTGGTTTTCAATATTTATTTCCAATATTTGAATGGGCACCAAGTTACACTTTTCAGTTCTTGAAATCTGATATCATAGCTGGAATCACTATTGCTAGTTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTCCCTCCAATTCTTGGATTATATTCGAGCTTTATACCGCCATTGATTTATGCTATGATGGGAAGTTCAAGAGATTTGGCAGTTGGGACAGTGGCAGTTGGATCTCTTCTGATGGGTTCCATGTTGGCCAGTGAAGTTAATCCAAACCAAAATCCAAGTCTTTATCTCCACCTTGCTTTCACAGCAACATTCTTTGCCGGTGTTTTGCAAGCTTCGTTGGGCTTCTTCAGGTTAGGGTTTATTGTGGATTTTCTGTCGCATGCGGCGATTGTAGGGTTCATGAGCGGAGCAGCCACGGTGGTTTGTCTGCAGCAACTGAAACCAATGCTAGGTCTTGAACATTTCACCCATGGTGCTGATCTGATATCAGTTTTGCGTTCTGTTTTTACGCAAGTTCATCAATGGAGATGGGAAAGCGCTGTTTTAGGATGTGTCTTCATTTTCTTTCTCCTTATCACAAGATACTTCAGCAAAAGACAACCAAAATTCTTTTGGGTATCAGCAATGACGCCGTTAGCGTCCGTTATATTGGGAAGTTTACTGGTTTATTTCACACATGCAGAAAATCACGGCGTTCAAGTGATTGGAGAATTGAAGAAAGGACTAAATCCAATCTCAGTCACAGAATTGGTATTCGTGTCTCCTTATATGACCACATCTATCAAGACAGGACTTATTGTTGGCATCATAGCTCTTGCGGAAGGAATAGCTGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATAGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGTTACCTCACAACAGGACCATTTTCGCGTTCGGCCGTGAACTATAACGCTGGATGCAAAACAGCAGCATCAAACATTGTGATGGCAATTGCTGTCATGTTAACTTTGTTATTTTTAACACCTTTGTTCTACTACACTCCTCTGGTCGTACTAGCTGCCATAATTGTATCTGCAATGCTTGGACTTATCGATTATCAAGCAGCCATCCATCTTTGGAAGATTGACAAATTCGACTTTGTCGTCTGCATTAGCGCATATTTCGGTGTTGTCTTTGGCAGTGTTCAAATGGGCTTAGTCATAGCAATTGTGATATCAGTACTTCGGTTACTGCTATTTATCGCACGGCCAAGGACATCTGTTTTAGGAAACATTCCAAACTCTGCAATATACAGAAACATTGAGCATTATTCAAATGCAAATCGAGTTCCGGGAATTCTAATTCTAAAGATTGACGCACCGATTTACTTTGCAAATGCAAGCTATTTAAGAGAAAGGATCTCAAGATGGATTGATGAAGAGGAAGACAGAATTAAATCTACAGGAGAGACAAGTTTGAAGTATATTATAATGGATATGAGTGCTGTTGGGAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGATTAACAAGATTTCTCAAAGAAAAGAACAGCAACTTGTGTTGGTGAACCCTGGAAGTGAGGTGATGAAGAAACTAAACAAGTCCCACTTTCAGAAGGATATGGGAGGAAATTGGATCTATCTGACAGTAGAAGAGGCTGTTAGAGCATGTAACTTCGTGCTCCATGCATGCAAAACGAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTGTGA 1992 0.4026 MGNVDYDYPRSGMNMNNVGENHVQHRVEIPPPQPFLKSMKYAMKETFFPDDPLRKFKNQPASRKLVLGFQYLFPIFEWAPSYTFQFLKSDIIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLASEVNPNQNPSLYLHLAFTATFFAGVLQASLGFFRLGFIVDFLSHAAIVGFMSGAATVVCLQQLKPMLGLEHFTHGADLISVLRSVFTQVHQWRWESAVLGCVFIFFLLITRYFSKRQPKFFWVSAMTPLASVILGSLLVYFTHAENHGVQVIGELKKGLNPISVTELVFVSPYMTTSIKTGLIVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYQAAIHLWKIDKFDFVVCISAYFGVVFGSVQMGLVIAIVISVLRLLLFIARPRTSVLGNIPNSAIYRNIEHYSNANRVPGILILKIDAPIYFANASYLRERISRWIDEEEDRIKSTGETSLKYIIMDMSAVGNIDTSGISMLEEINKISQRKEQQLVLVNPGSEVMKKLNKSHFQKDMGGNWIYLTVEEAVRACNFVLHACKTNPKRDESEGWNNV 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06453 663 Pfam Sulfate permease family 87 467 IPR011547 GO:0016020
Vivi1g06453 663 ProSiteProfiles STAS domain profile. 518 641 IPR002645 -
Vivi1g06453 663 Pfam STAS domain 519 637 IPR002645 -
Vivi1g06453 663 Gene3D STAS domain 498 643 IPR036513 -
Vivi1g06453 663 NCBIfam sulfate permease 74 637 IPR001902 GO:0016020|GO:0055085
Vivi1g06453 663 CDD STAS_SulP_like_sulfate_transporter 519 634 - -
Vivi1g06453 663 ProSitePatterns SLC26A transporters signature. 116 137 IPR018045 GO:0008271|GO:0008272
Vivi1g06453 663 PANTHER SULFATE TRANSPORTER 36 644 IPR001902 GO:0016020|GO:0055085
Vivi1g06453 663 FunFam Sulfate transporter 31 498 644 - -
Vivi1g06453 663 SUPERFAMILY SpoIIaa-like 524 641 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06453 Vivi-Chr1 146153074 146157744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06453 25 663 Inorganic Solute Cotransporters AT4G02700 67.500 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06453 K17471 - gmx:100787694 1103.97