Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06359 ATGTCCATGAAGAAGAACACTGCAGAGTTACAAAATCCAGAAATTATGATGCAAAAGAAAGCTATGGCTATTGAGAAGATCAATGCATATATGCAAAAGTTGAAAACAATGGAAAAGAAATTTGATCCACTATCTCATTTTTCTTTGAATAGAGTGTTATCTCAAGAGTCTCCACAATTTTATACCGAAGATGAGTTAGCACAAATAGAGAAAATCAATCACATTGTGTGTCAAGAAGCAAATCTCCTTCTTATTTCACAAAGTAGAGTGAAAAGAGTAGAAGTCAATGACAAAAAAAGGTGTCGTTCAAGTAACGAAGATATCATGTCTGATGGAGGAAGAAGAGTGAAATCAAAGTCCACAATTAAGAGAAAACCAATAATTCGCAAGAAAGAAACTGTGCTATCACCGCCACCAGAATTGCCTAATCATGTTAATAACATGATCAAAGTGTTGAATGGTAGTGATATTAAATATATCATGTGCAAGGAATTGTATAAAACTGATCTCAACCCTAACAACAATCGTCTTTCAATGCCAATTTCACAAATCAAGTCCGATTTTCTCACAGAAATAGAAAAAACATCCTTAAAAACAAGGGATCAAGAAGGAAAACCGTTTGGTTTAAAAGTGACTGTGCTAGATCCTTGTTTTAACGAGTTCTCACTGTCTTTGAAGAAGTGGGACATGACGAGTACTAGTATTTATAATCTTCATCCTGGTTGGACACCTGTTTTGTTGAAAAATAATTTTAAAGAGCATCAAAAACTTGACATTTGGTCATTTAGAGTTAATGGCAAGTTGCACCTTTTACTCAACGATAACGAGTCACAAGAAATTGAAAAAGGTAAAGAGTTGAAGAATTCAACTGCTGTTTCGAAAACGGAAGAATAA 894 0.34 MSMKKNTAELQNPEIMMQKKAMAIEKINAYMQKLKTMEKKFDPLSHFSLNRVLSQESPQFYTEDELAQIEKINHIVCQEANLLLISQSRVKRVEVNDKKRCRSSNEDIMSDGGRRVKSKSTIKRKPIIRKKETVLSPPPELPNHVNNMIKVLNGSDIKYIMCKELYKTDLNPNNNRLSMPISQIKSDFLTEIEKTSLKTRDQEGKPFGLKVTVLDPCFNEFSLSLKKWDMTSTSIYNLHPGWTPVLLKNNFKEHQKLDIWSFRVNGKLHLLLNDNESQEIEKGKELKNSTAVSKTEE 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06359 297 Pfam B3 domain-containing protein At2g31720-like 141 246 IPR005508 GO:0003677
Vivi1g06359 297 SUPERFAMILY DNA-binding pseudobarrel domain 159 270 IPR015300 -
Vivi1g06359 297 Gene3D - 141 277 IPR015300 -
Vivi1g06359 297 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 18 274 IPR005508 GO:0003677
Vivi1g06359 297 Coils Coil 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06359 Vivi-Chr1 143567064 143567957 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06359 140 272 B3 DNA Binding Superfamily AT1G05930 25.926 3.48e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06359 - - vvo:131619010 520.005