Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06323 ATGTTGCAGGATGTTTTTGATCCGCCACTCCCATCGAATTCAAATCCAGATCAACAACAACATCAGCATCATCAAAATCAACATCAACAACAGCAGCAACTTTCCGTTGATGAAATTTCCAGCCCTCTTAGCGCCGCGCAAATTTTCGAGCTATGTAACCCTGAGTTATTTCCGGAAGCTTTGCAGAATTCTGAGGTTACATCAAGCTCGAATTGTTGCTATGAAGAGAATTCCTCATATGCGACAAATATATTAGATGTAGAAACCAAGTTCAATAATGTAGAAACTAAGTTCAATAATAGCAATAGCAATAACACAGTAGTTGTCACAACTCCAACTAGCACCAACAACATCAACAATAACAATAACAATAACAATTCCAACAATAGCAATAATCTATCTGTTATCTTTGATTCGCAAGAAGAAATCGACAATGACATATCTGCTTCAATAGATTTCTCACTATCACCCTCTTTCAATGTTCCTTCATTCCTTCCAGTCACATCAACACAGCAAGTAGAACAATTTGATTTCAATTCTCATGTTCAACAGCTCACAGCATGTTCATCTGTCGAAGGCTTTTCACAGTATCATAATCCAAATGATTCAGTTGCACCTCTTATGGGAGCTCCATTATCATTACCACCTGTTTTTGAAGAGGATTGCATAACTTCTGTACCTTCTTATGTTCCTTTGAATCCTTCATCTCCTTCTTGCAATTATCTTAGTCCTGCTGGAATGGCCGGGTTCATGCCTAATGGCCCTCTTACCACTGCTTTGTCTACTGATAGTTCTGGTTTGTTTGGTGGAAACATTCTTCTCGGTCCTGAACTTCAGACACAAGAAATTGATTATCAAGGAGATAGTGGTAGAATTTATTGCGCAGATCCTATTCAGAGGGTGTTTAACCCTCCTGATCTTCAGGCTCTTAATACTGAGAATCAACAACTAGTAGCTGGTTCTGGAAGTTCTGCTAATTTAACACCAGAAATCTCAAACTTGGAAGACTCTACATTCAAAGTTGGAAAGCTTTCGGTTGAAGAAAGGAAGGAAAAGATTCATAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCATGCCGCAAAACACTGGCTGATAGCAGACCTCGAGTTAGAGGACGATTCGCAAAGAATGATGATTTTGGAGAGGCACAAAGAACTGCTAGTGGAAATCATGAAGAAGAAGATGAAGAAGAGGTAGTTGTGAAAGAGGAAGATGATATGGTTGATTCCTCAGATATATTTGCTCATATCAGTGGAGTGAACTCATTCAAATGCAACTATTCAATTCAATCATGGATTTAA 1344 0.3817 MLQDVFDPPLPSNSNPDQQQHQHHQNQHQQQQQLSVDEISSPLSAAQIFELCNPELFPEALQNSEVTSSSNCCYEENSSYATNILDVETKFNNVETKFNNSNSNNTVVVTTPTSTNNINNNNNNNNSNNSNNLSVIFDSQEEIDNDISASIDFSLSPSFNVPSFLPVTSTQQVEQFDFNSHVQQLTACSSVEGFSQYHNPNDSVAPLMGAPLSLPPVFEEDCITSVPSYVPLNPSSPSCNYLSPAGMAGFMPNGPLTTALSTDSSGLFGGNILLGPELQTQEIDYQGDSGRIYCADPIQRVFNPPDLQALNTENQQLVAGSGSSANLTPEISNLEDSTFKVGKLSVEERKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGEAQRTASGNHEEEDEEEVVVKEEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06323 447 MobiDBLite consensus disorder prediction 384 406 - -
Vivi1g06323 447 MobiDBLite consensus disorder prediction 8 35 - -
Vivi1g06323 447 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 16 410 IPR045281 GO:0009909
Vivi1g06323 447 Pfam CCT motif 349 391 IPR010402 GO:0005515
Vivi1g06323 447 ProSiteProfiles CCT domain profile. 349 391 IPR010402 GO:0005515
Vivi1g06323 447 MobiDBLite consensus disorder prediction 384 416 - -
Vivi1g06323 447 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06323 Vivi-Chr1 142960271 142963366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06323 329 397 C2C2-CO-like Transcription Factor Family AT5G24930 42.029 1.62e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g06323 CCT 6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06323 - - aprc:113871720 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06323 1 142960271 142963366 Vivi1g06323 1 142960271 142963366 ECH