Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06287 ATGGAGCAAAAAATAGTTTCTTCTCTTCATCTTTTCACAGAGTTCAAACCACACATGCTCATGATCTTAGCCCAAATTTCTTATACTTTCTTATATTTCATCACTGAAGCTTCCTTCAATCATGGAATGAGTCCTTATGTTTATGTTACTTATCGCCATGCTATCGCCGGGGTTGTCATGCTTCCTTTCGCGTATTTTCTCGAAAGAAAAGTAAGACCAAAGTTGACAATTGCTCTATTTATGGAGTTTTTTCTGCTTTCAGTGTTAGGGATGAGTTTATCTATAAACTTGTACTTTGCAAGCTTGAAGTATACTTCTCCAACCTTTCTTTCTTCCATGTACAACACCATATCTTCTCTCACCTTCATTATTGCAGTAGTACTAAGGTTTGAGGTTGTTGATATTCATAATCCACGTGGCATAGCGAAAGTACTTGGAACTATAGTGTCCTTGGCTGGAGTTATGACCATGACACTATACAAAGGACCTATCATCAGAAATTTGTGGCATCCTCTAATTCATATTCCACCAAAAAGTGCTTCTATTGATGAGAGTAGCTTAAAGGGCTCACTTCTTACAGTTTCTTGTTGTGTTTTGTTTTCTATGTCCTACATCATGCAGGCTTCCACTTTGAAAAGATATCCAGCACAACTATCACTCACAACATGGTTGTGTTTTATTGGAGGAGCACAATCAGCTGTTTTCACAATGATAGCAGAACGCAATAACCCTTCAGCATGGATTATAGGATTCAAATTTGACTTTTGGTCAACAATATATGGGGGGATTATTGTTGGTGGTTTGTTCATATACGTTAACCTATGGTGCACTGAGATAAAAGGACCAGTTTTTGTGACAGTATTTAACCCTCTATGTACTATATTTGTGACAATTCTAGCATATTTTGTCGTTGGTGAAAAACTTTATTTGGGCAGTATCATAGGGGCAATTATTGTGATCACGGGTTTGTACTTGTTGCTGTGGGGTAAAGAAGGTGACAATGAGGTTGATTTCAAGGCCAAAGATAAATTGCGGTACAATATTGAAGACATTGAAGAATGCAAAATTTAG 1071 0.3716 MEQKIVSSLHLFTEFKPHMLMILAQISYTFLYFITEASFNHGMSPYVYVTYRHAIAGVVMLPFAYFLERKVRPKLTIALFMEFFLLSVLGMSLSINLYFASLKYTSPTFLSSMYNTISSLTFIIAVVLRFEVVDIHNPRGIAKVLGTIVSLAGVMTMTLYKGPIIRNLWHPLIHIPPKSASIDESSLKGSLLTVSCCVLFSMSYIMQASTLKRYPAQLSLTTWLCFIGGAQSAVFTMIAERNNPSAWIIGFKFDFWSTIYGGIIVGGLFIYVNLWCTEIKGPVFVTVFNPLCTIFVTILAYFVVGEKLYLGSIIGAIIVITGLYLLLWGKEGDNEVDFKAKDKLRYNIEDIEECKI 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06287 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 330 - -
Vivi1g06287 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Vivi1g06287 356 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Vivi1g06287 356 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Vivi1g06287 356 PANTHER WAT1-RELATED PROTEIN 17 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06287 Vivi-Chr1 141918175 141920320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06287 3 352 Nodulin-like Gene Family AT5G07050 41.322 7.33e-92 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06287 - - gmx:100527877 526.939