Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06272 ATGTTACTCTTTAGAAGTATTCAAGATTACATGTTCGATGAAAATGTTTGCCTCCTACTTCGGGCCAAGTGGTTCAAGCCTTTAGCTGTTGAAGAGCGTCCAGTTGTTGAAGAAGATATCTATGAGATAAAAGACTATTATTATCAGTATGAAGAAGCTGATGATGATCTAGATGACAATGAGGATTACTATGGTGCTTCAGCAAATGTCCGGCTTGGCAACCGTAGATGGGGAGACAACGGTTTTGTAAGGGCTGGGCGTCAAGAAGCTCGGCCGGTCCATCGACCAAGCTTCCAGGATTCAGGAGCAAGTTCATCGCGTGAGCCAAAGAAGAAAGAACAAGAGTCTCCAAAAGTTATGACAGGAAGACGGGCAAAGAGGGCACTAAAAAGGGAAGCTGCTAATAAGGCAGCTGAAGTGAAGCACCAGAAGCATTTGGATAGGTTGGGTAGGAACTAG 459 0.4466 MLLFRSIQDYMFDENVCLLLRAKWFKPLAVEERPVVEEDIYEIKDYYYQYEEADDDLDDNEDYYGASANVRLGNRRWGDNGFVRAGRQEARPVHRPSFQDSGASSSREPKKKEQESPKVMTGRRAKRALKREAANKAAEVKHQKHLDRLGRN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06272 152 MobiDBLite consensus disorder prediction 73 152 - -
Vivi1g06272 152 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 6 152 - -
Vivi1g06272 152 MobiDBLite consensus disorder prediction 105 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06272 Vivi-Chr1 140806695 140807928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06272 6 151 C3H Transcription Factor Family AT5G19430 49.701 4.53e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06272 - - vvo:131608988 263.077