Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06257 ATGGCAGGACAACTAGGAGTGCTTAATGCACTCGATGTCGCAAAGACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGATTTTTCACAGATGCATACGATCTCTTCTGCATTTCACTTGTGACAAAGTTGTTAGGAAGAATCTATTACACAGATTACAGCAAACCGAAACCTGGTGTTCTTCCTCCCGGTGTTCAAGCCGGTGTAACAGGTGTCGCGCTAGTTGGAACTTTAGCAGGCCAACTATTCTTCGGTTGGCTTGGTGACAAATTGGGAAGAAAAAAGGTTTATGGTATGACCCTTATGCTTATGGTGGGTTGTTCACTTGCCTCAGGACTTTCCTTTGGAAATAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTCAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTACCCTCTTTCAGCTACAATTATGTCTGAATATGCTAACAAAAAGACGCGAGGCGCTTTCATCGCCGCGGTGTTTGCTATGCAGGGATTCGGAATCATGGCTGGTGGAATATTTGCTTTGATTGTAGCTACTGCATTTGATCACAAATATAAAGTTCCTACTTATGAAGAAAACCCGGAAGCGTCGCTTGTGTTGCCGGCTTTTGATTTCGTTTGGCGTTTGATTTTGATGTTTGGTGCTGTTCCAGCCGCTCTTACCTATTACTGGCGTATGAAGATGCCCGAGACGGCTCGTTACACAGCACTTGTTGCTAAGAACGCGAAACAAGCCGCTTCTGATATGTCTAAGGTGTTACAAGTTGAACTTCAGGCTGAAGAGGCGAAAGTGCAGGAAATAGATGAGAACCAAAGCCAAAAGTTTGGCCTTTTTAGCAAGCAATTCGCCAAGCGCCACGGAATGCACTTGTTGGGAACAACAACTACTTGGTTTTTGTTGGACATTGCTTTCTACAGTCAGAATCTTTTCCAAAAAGACATTTTCACTGCCATTGGATGGATCCCTCCGGCGAAAGAAATGAATGCAATTCATGAACTTTACAGGATTGCAAGAGCACAAACACTTATAGCAATGTGCAGTACAGTTCCAGGTTACTGGTTCACCGTCGCGTTTATCGATTACATGGGTCGATTCGCGATCCAACTGATGGGTTTCTTCTTCATGACTGTTTTCATGTTTGCTCTAGCCATACCTTATGATCACTGGAAACAAAAAGATAACAGAATCGGGTTTGTCGTGATGTACTCGCTAACTTTCTTCTTCGCCAATTTCGGTCCAAATGCCACTACATTCGTTGTACCGGCCGAGATTTTCCCGGCAAGGCTAAGATCAACCTGTCACGGTATCTCGGCTGCTGCTGGAAAAGCTGGAGCAATTGTTGGTGCATTTGGATTCTTATACGCTGCACAAAGTAAGAAAGCCTCCGAGACCGATACTGGTTACCCAACCGGTATTGGAATTAAGAACTCCCTCATTATGCTTGGTGTTGTTAACTTCTTTGGAATGGTATTCACCTTCTTAGTCCCTGAACCAAATGGTAAATCATTGGAAGAAATGAGTGGTGAGAATGAAGATGATGGTGTTGAGGCTATTGAGATGGCAGGGCCAGGAACTGCTAGGACAGTACCTGTTTAA 1620 0.4389 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYSKPKPGVLPPGVQAGVTGVALVGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVGCSLASGLSFGNSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIFALIVATAFDHKYKVPTYEENPEASLVLPAFDFVWRLILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELQAEEAKVQEIDENQSQKFGLFSKQFAKRHGMHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWKQKDNRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKKASETDTGYPTGIGIKNSLIMLGVVNFFGMVFTFLVPEPNGKSLEEMSGENEDDGVEAIEMAGPGTARTVPV 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06257 539 Coils Coil 258 278 - -
Vivi1g06257 539 Pfam Sugar (and other) transporter 24 515 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi1g06257 539 Gene3D MFS general substrate transporter like domains 270 529 IPR036259 -
Vivi1g06257 539 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Vivi1g06257 539 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Vivi1g06257 539 CDD MFS_PhT 24 506 - -
Vivi1g06257 539 NCBIfam phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vivi1g06257 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 506 - -
Vivi1g06257 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Vivi1g06257 539 FunFam Inorganic phosphate transporter 1-6 19 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06257 Vivi-Chr1 140416718 140419795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06257 1 521 Inorganic Solute Cotransporters AT3G54700 79.502 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06257 K08176 - gmx:100802890 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g06257 1 140416718 140419795 Vivi1g06257 1 140416718 140419795 ECH