Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06255 ATGGCTAAGGAACAACTGAAGGTTCTGAATGCCCTTGATGTGGCCAAGACACAAATGTACCATTTCACAGCAATTGTGATCGCTGGAATGGGTTTCTTTACTGATTCCTATGATCTCTTCTGCATTTCCCTTGTCACCAAATTGCTCGGTCGTATCTATTACTATGATGGTGGGAACAATCCAGGTTCTCTGCCACAGAATGTTTCTGCTGCAATCAATGGTGTTGCCTTCTGTGGAACACTTGCTGGACAACTTTTCTTTGGTTGGCTTGGTGACAAAATGGGAAGGAAACGTGTTTATGGAATGACTCTTATGCTTATGGTCATAGCTTCCCTTGCTTCTGGTCTCTCCTTTGGAAAGGATCCCAAAGCTGTTGTGTCTACTCTTTGCTTCTTTAGGTTTTGGCTTGGATTTGGAATCGGTGGTGATTATCCTCTTTCCGCTACAATCATGTCTGAGTATGCAAACAAAAAGACCCGAGGTGCATTTATAGCTGCTGTTTTTGCTATGCAAGGTTTTGGAATTTTGGCAGGTGGAGCTGTTGGAATTATAGTTTCGTCTGTTTTCAAAGCCTTGTATCCTTCTCCAGCTTTTCAGGTTAACCCAAATCTGTCCACAGTTCCACAAGCTGATTATGTTTGGAGGATAATCTTGATGTTCGGGGCTATTCCGGCCGCGTTGACATACTATTGGAGGATGAAAATGCCTGAAACTGCAAGATATACTGCTTTGGTTGCAAAGAATGCTGAGCAAGCTGCTGCGGATATGGAAAAAGTTATGCAAGTTGAGATAGAAACTGAATCGGAAAAGATTCAACAGTTGGATCAAAATCAAAGACAAGGAGGGAATGATTTTGGTTTGTTTACAAAAAGGTTTCTTCGTCGTCATGGACTGCATTTGTTTGCAACTGCTATTACTTGGTTCTTGTTGGATATTGCCTATTATAGTCAGAATCTTTTCCAGAAAGATGTTTTTAGCGCAATTGGTTGGATACCAGAAGCTAAAACCATGAGTGCCCTTGAAGAGGTTTATAAAATTGCTAGAGCACAGACACTTATTGCCCTTTGCAGCACTGTTCCTGGTTACTGGTTCACAGTTGCATTCATTGATAGAATAGGAAGATTTACAATCCAATTGATGGGATTTTTCTTCATGACGGTGTTCATGTTTGCATTGGCTATTCCTTACCATCACTGGACTTTGAATGGAAACCAAATTGGATTTGTTGTCATGTATTCATTGACATTCTTCTTTGCTAATTTCGGTCCAAATGCAACGACGTTTGTGGTTCCGGCTGAGATTTTCCCGGCAAGACTAAGGTCAACATGTCATGGAATATCAGCTGCGGCTGGAAAAGCTGGGGCAATGGTAGGAGCTTTTGGTTTCTTGTATGCACAAAATAGCATTGGATTGAGAAATGTGCTTCTGATTTTGGGGGGAGCCAACTTGTTGGGAATGTTGTTTACATTGTTGGTTCCTGAATCTAAAGGAAAATCTTTGGAAGAGATTTCTGGTGAAGCTGATGAAGAAACTAATAATACTAATAGAGAATCTGCATTGAAGGCTGGTCTTCAAGTTTAG 1581 0.4105 MAKEQLKVLNALDVAKTQMYHFTAIVIAGMGFFTDSYDLFCISLVTKLLGRIYYYDGGNNPGSLPQNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVIASLASGLSFGKDPKAVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGAVGIIVSSVFKALYPSPAFQVNPNLSTVPQADYVWRIILMFGAIPAALTYYWRMKMPETARYTALVAKNAEQAAADMEKVMQVEIETESEKIQQLDQNQRQGGNDFGLFTKRFLRRHGLHLFATAITWFLLDIAYYSQNLFQKDVFSAIGWIPEAKTMSALEEVYKIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYHHWTLNGNQIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNSIGLRNVLLILGGANLLGMLFTLLVPESKGKSLEEISGEADEETNNTNRESALKAGLQV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06255 526 SUPERFAMILY MFS general substrate transporter 12 504 IPR036259 -
Vivi1g06255 526 Pfam Sugar (and other) transporter 25 504 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi1g06255 526 FunFam Inorganic phosphate transporter 1-6 20 518 - -
Vivi1g06255 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 500 - -
Vivi1g06255 526 MobiDBLite consensus disorder prediction 501 515 - -
Vivi1g06255 526 NCBIfam phosphate:H+ symporter 11 506 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vivi1g06255 526 Gene3D MFS general substrate transporter like domains 20 262 IPR036259 -
Vivi1g06255 526 Gene3D MFS general substrate transporter like domains 276 521 IPR036259 -
Vivi1g06255 526 MobiDBLite consensus disorder prediction 501 526 - -
Vivi1g06255 526 CDD MFS_PhT 25 496 - -
Vivi1g06255 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 497 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06255 Vivi-Chr1 140350888 140352620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06255 1 505 Inorganic Solute Cotransporters AT2G38940 76.108 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06255 K08176 - gmx:100802365 919.072