Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06070 ATGAAGTCATTGAAAATGGTAATGGTTAAGTTGATGACAGTGTTTATGCTAATAGAGGTGATTACGTGCCAATTTGGTTTTGGATTTGGAGCAGATGGTGGGTTGAATATGAACTACTACTTGATGAGTTGCCCTTTTGTTGAACCTGTTGTTAAGAACATAGTGAATAGAGCTTTGGATAATGATGCTACCCTTGCAGCTGCTCTTATTAGAATGCACTTCCATGACTGCTTCATTGAGGGATGTGATGGGTCAATTCTACTTGATTCCACTAAGGATAACACAGCAGAAAAGGATTCACCAGCAAATTTAAGCTTAAGAGGATACGAAGTCATAGATGATATCAAAGATGAACTTGAAAGACGATGTCCTGGTGTGGTTTCATGTGCTGATATTCTTGCTATGGCTGCCACAGAAGCTGTTTTCTATGCTGGAGGTCCGGTTTATAACATACCTAAAGGAAGAAAAGACGGAAGAAGATCGAGAATTGAGGATACTAGAAATTTACCATCACCTACCTTTAATGCCTCTGAGCTCATTAGGTTGTTTGGTCTACATGGTTTTTCGGCTCAAGAGATGGTCGCTCTCTCGGGGGCACATACATTAGGAGTGGCAAGGTGTTCATCATTCAAGAACAGATTAAGCCAAGTGGATCCAGCTTTGGATTCAGAATTTGCAAAGACACTATCTAGAACATGTACTTCTGGTGACAATGCGGAACAACCATTCGATGCAACCAGGAACGATTTCGACAATGTTTACTTTAGAGCTTTGTTGAGGAGAAATGGTGTTCTATTTTCAGATCAAGACCTCTATACTAGTCCAAGAACATGGAACTTTGTGAATGCTTATGCAATGAATGAAGCATTGTTCTTTCTTGATTTTCAACGCGCGATGGTGAAGATGGGATTGCTTGATATTAAACAAGGTTCTAATGGTGAAGTTCGAGACAATTGCCGCAAAATCAACTAA 972 0.3992 MKSLKMVMVKLMTVFMLIEVITCQFGFGFGADGGLNMNYYLMSCPFVEPVVKNIVNRALDNDATLAAALIRMHFHDCFIEGCDGSILLDSTKDNTAEKDSPANLSLRGYEVIDDIKDELERRCPGVVSCADILAMAATEAVFYAGGPVYNIPKGRKDGRRSRIEDTRNLPSPTFNASELIRLFGLHGFSAQEMVALSGAHTLGVARCSSFKNRLSQVDPALDSEFAKTLSRTCTSGDNAEQPFDATRNDFDNVYFRALLRRNGVLFSDQDLYTSPRTWNFVNAYAMNEALFFLDFQRAMVKMGLLDIKQGSNGEVRDNCRKIN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06070 323 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 FunFam Peroxidase 170 302 - -
Vivi1g06070 323 ProSiteProfiles Plant heme peroxidase family profile. 34 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 Pfam Peroxidase 51 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Vivi1g06070 323 CDD secretory_peroxidase 35 322 IPR033905 GO:0004601|GO:0042744
Vivi1g06070 323 SUPERFAMILY Heme-dependent peroxidases 34 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 PANTHER PEROXIDASE 72-RELATED 34 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g06070 323 FunFam Peroxidase 38 178 - -
Vivi1g06070 323 Gene3D Peroxidase, domain 2 170 302 - -
Vivi1g06070 323 Gene3D - 38 323 - -
Vivi1g06070 323 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06070 Vivi-Chr1 135161979 135164823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06070 5 323 Peroxidase AT4G33420 69.592 1.26e-163 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06070 K00430 - gmx:100776019 506.138