Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06029 ATGGCCATCCACAACACCATCTTCTTCTCTCTTTCTTCTCTCCTCTTCACATTCCTCCAAATCCAAACCAAAGTCTTCTCTCTCCAATACAAAGTTGGAGATCTAAATGCCTGGAGCTTACCCTCCTCATCAAACCCTCAAATCTACACCAAATGGTCCAAACTTCACAACTTCACCCTTGGAGACTCACTTTTGTTTCTATATCCACCAAGTCAAGATTCATTGATTCAAGTGACACAAGAGTCCTACAAAAGCTGCAACACTAAAGATCCAATATTGTTTATGAACAATGGTAACTCTTTGTTTAACATAACATCATCACATGGTGATTTTTATTTCACAAGTGGAGTCAATGGTCATTGCCAAAAGAATCAGAAGATTCATATATCTGTTGGTGGAACTGGAAATGTTGATGTAGAAGCTAGTAGTCCTAATTCATTGCCTGCAAATGCAAATGCACCTTCTTATCAAGCAGCTTTTGGGAACATTCCAGTAGCTCCTTCTTCATCAAATTCACATCACATAGCTTCAAATTTTCATGTCTTTGTTATTGGATTTGGATCTGTCATATATGCAATGTTCTTTGGTTTAATGTAA 597 0.3752 MAIHNTIFFSLSSLLFTFLQIQTKVFSLQYKVGDLNAWSLPSSSNPQIYTKWSKLHNFTLGDSLLFLYPPSQDSLIQVTQESYKSCNTKDPILFMNNGNSLFNITSSHGDFYFTSGVNGHCQKNQKIHISVGGTGNVDVEASSPNSLPANANAPSYQAAFGNIPVAPSSSNSHHIASNFHVFVIGFGSVIYAMFFGLM 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06029 198 FunFam Early nodulin-like protein 1 27 136 - -
Vivi1g06029 198 SUPERFAMILY Cupredoxins 27 131 IPR008972 -
Vivi1g06029 198 Gene3D - 28 143 IPR008972 -
Vivi1g06029 198 PANTHER BLUE COPPER PROTEIN 27 151 IPR039391 GO:0009055
Vivi1g06029 198 Pfam Plastocyanin-like domain 43 124 IPR003245 GO:0009055
Vivi1g06029 198 ProSiteProfiles Phytocyanin domain profile. 28 133 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06029 Vivi-Chr1 133959583 133960514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06029 1 165 Phytocyanin Superfamily AT1G64640 53.939 1.36e-54 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g06029 - - gmx:100527517 245.358