Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g06022 ATGGAGTACTCTGATTGCGTGAAGGCCTTTGATGCTTATGCAAGCTCAGGTAAGCAAACTGACGAACTCATTAACTTTTACAATTGGATTGATGTTGTGCTTAATGATGAGTCCAAGCGCGAGACTCCTGCTATTGTGTGTTTTGGTGATAAACAAAGGTTTATTGGGACGGCTGAGGCTGCTTCTACTATGATGAACCCGAAGAGTTCTATCTCGCAGATGAAGAGGTTGATTGGACCTGATGGGTATCCTTTGATTCACGCGCGGTATCTTGGGGAGCCTAGAGTGTTTACTGCTACTCATGTCTTTGCCACGATGTTGGGGAATCTTAAAGAGATTGCGCAGAAAAATTTGAATGCGGCTGTTGTTGATTGCTGTATTGGGATTCCAATTTATTTTACTAATCTTCAAAGGAGAGTTGTGTTGGATGCAGCTACTATTGCTGGTTTGCACCCGCTTCACTTGATTCATGAAAGGATAGCAACTGCTTTGGCTTATGGGATTTACAAGACCGATCTTCTTGAGAATGATCAGCTGAATGTTGCTTTTGTTGATGTTGGGCATGCTAGCATGCAAGTTTGTATTGCTGGATTTAAAAAGGGGCAGCTGAAAGTATTGGCACATTCGTACAATAGGTCCCTGGGTGGTAATTTTGATGAGGCTTTGTTTCATCATTTTGCTGCAAAGTTATATTTTACATTGTTGTTTACACCCCTTTACTTGATATCATTCTCCACCGTCAAAAATATGGGTTCAAAGTTGTTATGGCACATGGAAACTAGAAGTTGCAGTGTCATGCAAGCCTTTCGATACTACTTGTTCAAATGCTTCTGA 834 0.4137 MEYSDCVKAFDAYASSGKQTDELINFYNWIDVVLNDESKRETPAIVCFGDKQRFIGTAEAASTMMNPKSSISQMKRLIGPDGYPLIHARYLGEPRVFTATHVFATMLGNLKEIAQKNLNAAVVDCCIGIPIYFTNLQRRVVLDAATIAGLHPLHLIHERIATALAYGIYKTDLLENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAHSYNRSLGGNFDEALFHHFAAKLYFTLLFTPLYLISFSTVKNMGSKLLWHMETRSCSVMQAFRYYLFKCF 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g06022 277 Gene3D - 81 105 - -
Vivi1g06022 277 Pfam Hsp70 protein 30 229 IPR013126 GO:0005524|GO:0140662
Vivi1g06022 277 Gene3D Actin; Chain A, domain 4 215 229 - -
Vivi1g06022 277 Gene3D - 171 214 - -
Vivi1g06022 277 SUPERFAMILY Actin-like ATPase domain 28 170 IPR043129 -
Vivi1g06022 277 Gene3D - 106 170 - -
Vivi1g06022 277 Gene3D - 30 71 - -
Vivi1g06022 277 SUPERFAMILY Actin-like ATPase domain 176 232 IPR043129 -
Vivi1g06022 277 PANTHER HSC70CB, ISOFORM G-RELATED 30 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g06022 Vivi-Chr1 133566235 133567134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g06022 27 226 Calmodulin-binding Proteins AT5G02500 30.667 5.01e-31 119