Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05979 ATGGAGCCTCACTTTAATGTCTCCCTTCCATTAATGTTGCTAATTATCACTCCTTTTCTTTTACTTTCTCTCCATGCCAAAGCTGAAACCTCCTCCACCTACATAATCCACATGGACAAATCCCTCATGCCTCAAGTCTTCACAAGCCATCATAATTGGTATGAATCCACTCTTGATTCCACAAAATCATCAAAAAATTTAGTGTACACTTACAATCATGCCATGCATGGATTCAGTGCAGTACTATCAAAAGAAGAGTTAAACAACCTCAAAAAATCTCATGGTTTTGTCACAGCTTACCCTGACAGAACAGCAACAATAGACACAACACACACCTTTGAGTTTGTCTCATTAGACCCTTCAAAAGGGCTATGGAATGCATCAAACTTAGGTGAAAATGTTATTGTTGGCCTTATTGACTCTGGTATTTGGCCTGAAAGTGAAAGCTTTCGAGACAACGGCATGTCGAAAAACATCCCAACAAAATGGAAAGGAAAATGCGAAATAGGACAAGATTTCAACACTTCAATGTGCAATTCAAAACTCATTGGAGCAAGATACTTCAACAAAGGTGTCATTGCTTCAAAACCAAATGTCAAAATCAGTATGAACTCAGCTAGAGACTCACAAGGACATGGTAGTCACACATCCTCGACTGTCGCCGGAAACTATGTCGAAGATGCATCTTTCTTTGGTTATGCCAAAGGTGTAGCTAGAGGCATTGCACCAAAAGCTAGAATTGCAATGTATAAAGTCCTCTGGGACGAAGGACGACAAGCTTCCGATGTTCTCGCAGGAATGGACCAAGCAATTGCTGATAACGTTGATGTTATTTCAATCTCTTTAGGTTTTGATAATGTTCCACTCTATGAAGATCCAGTTGCAATAGCTTCATTTGCAGCCATGGAGAAAAATGTTGTTGTTTCATCTTCTGCTGGAAATGAAGGTCCACATCTTGGAACTCTACACAACGGAATCCCTTTGGTTATAACCGTGGCCGCGGCCACAATCGACCGAACTTTCGGAAGTTTGAAACTCGGAAACGGCGAAACTATCATTGGTTGGACATTGTTTCCTGCTACTAATGCTATTGTTGAGAATCTTCCTCTTGTTTACAACAAAACTCTATCATCATGCAATTCAATTAGTCTCTTAAGTCAAGCTTCAAGAAGAGGAATCATTGTTTGTGAAGCACTTGAATCAGTTTCAGTGATAAGCCAAATCAATAATGTTACTTTAGCAGGTGTAATAGGTGCTGTTTTCATTTCAGAAGATCCAATACTACTTGAAACAGGAAGACTTTTTTCTCCAAGTATTGTGATTAATCCAAAAGACAAAAAAGCACTTATTCACTACATAAAAAGTGCTGAATTTCCAATAGCTAGTATCAACTTTCAACAAACATTTGTTGGTGTAAAACCAGCACCTGCTGCTGCTTACTACACTTCAAGAGGTCCTTCCAAAAGCTATCCAAGAATCCTAAAGCCTGATGTAATGGCACCCGGTACCAACGTTCTAGCCGCGTATGTTCCGAATCTATCCTCAGCTAGTATCGGAACAAATGTTTTCTTGTCAAGTAACTACAATCTTCTTTCAGGTACATCGATGTCGTGTCCTCACGTGTCAGGCGTCGCGGCTTTATTAAAAGCCGCGAGGCCTGACTGGAGTCCAGCTGCTATAAGATCAGCAATAGTTACAACAGCTAATCCATTAGATAATACTCAAAACCCGATATCGGATAATGGCAATCCGTCTCAATATGCTTCGCCGCTCGCTATGGGAGCAGGTGAAATTGATCCTAATAAAGCATTGGATCCTGGTCTAATATATGATGCTACACCACAAGATTATGTTAACCTGCTTTGTGAGTTTGGTTACACGCATAGTCAAATATTGACTATTACAAGGTCTAAAAAGTATAACTGTGATAACCCTTCTTCTGATCTTAATTATCCTTCATTTATAGCTTTGTATGGTAGGAAAACAAGGACGATGGTGCAGAAGTTTTTGAGGACTGTGACTAACGTTGGAGATGGGGCTGCTAGTTATAGTGTTAAGGTGAGAAAACCAAAGGGTTGTGATGTTAGTGTTTTGCCTGAGAAAATGGAATTTGGGTATAAGAATGAGAAAAAGAGTTATAGTGTTGTTGTGAAGTGTAGGAGGAAGAATAAGAAGGAAAAAGATGTGACATTTGGTGATATTGTTTGGGTTGAAGAGGGTGGTTTTGGACGTAAGGTTAGGAGTCCTATTGTTGTGGCACCAAGTGACATTGTATGA 2277 0.3975 MEPHFNVSLPLMLLIITPFLLLSLHAKAETSSTYIIHMDKSLMPQVFTSHHNWYESTLDSTKSSKNLVYTYNHAMHGFSAVLSKEELNNLKKSHGFVTAYPDRTATIDTTHTFEFVSLDPSKGLWNASNLGENVIVGLIDSGIWPESESFRDNGMSKNIPTKWKGKCEIGQDFNTSMCNSKLIGARYFNKGVIASKPNVKISMNSARDSQGHGSHTSSTVAGNYVEDASFFGYAKGVARGIAPKARIAMYKVLWDEGRQASDVLAGMDQAIADNVDVISISLGFDNVPLYEDPVAIASFAAMEKNVVVSSSAGNEGPHLGTLHNGIPLVITVAAATIDRTFGSLKLGNGETIIGWTLFPATNAIVENLPLVYNKTLSSCNSISLLSQASRRGIIVCEALESVSVISQINNVTLAGVIGAVFISEDPILLETGRLFSPSIVINPKDKKALIHYIKSAEFPIASINFQQTFVGVKPAPAAAYYTSRGPSKSYPRILKPDVMAPGTNVLAAYVPNLSSASIGTNVFLSSNYNLLSGTSMSCPHVSGVAALLKAARPDWSPAAIRSAIVTTANPLDNTQNPISDNGNPSQYASPLAMGAGEIDPNKALDPGLIYDATPQDYVNLLCEFGYTHSQILTITRSKKYNCDNPSSDLNYPSFIALYGRKTRTMVQKFLRTVTNVGDGAASYSVKVRKPKGCDVSVLPEKMEFGYKNEKKSYSVVVKCRRKNKKEKDVTFGDIVWVEEGGFGRKVRSPIVVAPSDIV 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05979 758 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 752 IPR045051 -
Vivi1g05979 758 FunFam Subtilisin-like protease SBT1.5 133 344 - -
Vivi1g05979 758 Pfam Peptidase inhibitor I9 33 105 IPR010259 -
Vivi1g05979 758 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Vivi1g05979 758 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Vivi1g05979 758 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Vivi1g05979 758 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Vivi1g05979 758 CDD Peptidases_S8_3 106 569 IPR034197 -
Vivi1g05979 758 Pfam Subtilase family 131 576 IPR000209 GO:0006508|GO:0008236
Vivi1g05979 758 CDD PA_subtilisin_like 343 463 - -
Vivi1g05979 758 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 107 IPR037045 -
Vivi1g05979 758 Pfam Fibronectin type-III domain 648 752 IPR041469 -
Vivi1g05979 758 Gene3D - 621 754 - -
Vivi1g05979 758 FunFam Subtilisin-like protease SBT1.9 22 108 - -
Vivi1g05979 758 Gene3D Peptidase S8/S53 domain 133 617 IPR036852 GO:0004252|GO:0006508
Vivi1g05979 758 Gene3D - 338 470 - -
Vivi1g05979 758 SUPERFAMILY Subtilisin-like 108 608 IPR036852 GO:0004252|GO:0006508
Vivi1g05979 758 ProSiteProfiles Serine proteases, subtilase domain profile. 112 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05979 Vivi-Chr1 132053730 132056006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05979 19 750 Subtilisin-like Serine Gene Family AT2G05920 42.190 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05979 - - gmx:100806072 1142.87