Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05932 ATGCCATTTTATGAACACATGGAAAAGGGTAGCTTAGGAGAGTTACTTCATGGAGAAGCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTAGGATTGCTCTAGGAACTGCACAAGGACTATCTTATTTGCACCATGATTGCAAGCCGAGGATTATCCACCGCGATATCAAGTCCAATAACATACTTATCGACCATGAATTCGAAGCTCATGTTGGTGATTTCGGTTTGGCTAAACTTATCGATATCTCAAAGTCGAAGTCAGTGTCTGCAGTTGTTGGCTCTTATGGCTACATTGCCCCTGAATATGCATACACAATGAAAGTCACGGAAAAATGTGATGTATACAGCTATGGAGTAGTGCTACTGGAGTTACTAACAGGGAAGAAGCCAATCCAATCATTGGATCAATGTGGTGGTGATCTTGTAACATGGGTGACAAATCATATCAACAAATATTCATTGAAACTAGACATCATTGATGCAAAATTGGACCTACTAGATGAAATTGATGTTGCTCAAATATTTGATGTCTTGAAAATTTCTTTACTTTGCACCGACGCTTATCCTTCTAGACGACCGACCATGCGTAAGGTTGTTGCAATGCTTACAATTTCTAGTAAAAGGAAAGAGCAATCTTTGTTCTCTCCATGTCATGAATCAATAAGGACCAGAGGCAAGGACGATTCTATTGCGGGACGGGCCAGCGATAGAGTCGATGCTCTTGCTCGAGCTGCTGATGAGGCACAGGTCGCAGAGCTACGTGTTGGATGCCTTCCTCCGACCAGTTCTAATCAAAAACAGAGGACTGAGCAGCAGGCGGTGGCGGGGTTCCTTGCACCTCGCCACCGGACTGGTAGAGCAGCTACTGCTATGGTTGAGGTTGAGGAGTCGGTGGCTACGGTCGAGGAGACGGTGGCTGAGGTTGAGTTGCCGGTGGAAGAGGTTGAGGAGCGTCAAGTGTTGAAGGTCGCTTCTCACAGGTCAAAGTTGAAGAACTTCCCCGAGTGTCAGATACCTGAGCAGGTGAGAAGGATAGTTCAGGATTTTCATGTGATGGACTTTGTTGGATGCTCGTTGACGATGTTGGATGCCTCTCTGTTATCAGCTTCTGTTGAGAGGTGGCACCTAGAGACATCATCCTTCCATCTTCCATTTGGGGAGATGACGGTGACTTTAGATGATGTGGATGCCCTCTTTCACATTCTGATTGCTAGTACATTTTTCACACCAGTTTATAGGGACCAGGCGACGGCGGTCCTCATGGTTATGGATGCGTTGGAGGTTGATGAGGTGGTGGTGTTGAGTGAGTTTGGTGAGACTCGGGGCTTTCACCTTAGGATGTCTTGTTTGAGGAGGATTTATCAGGAGCTTGTGCATGCAGATAGGTACCAGGCTGTCGCTAGGGCGTAG 1410 0.4624 MPFYEHMEKGSLGELLHGEASSSLDWYSRFRIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSVSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPIQSLDQCGGDLVTWVTNHINKYSLKLDIIDAKLDLLDEIDVAQIFDVLKISLLCTDAYPSRRPTMRKVVAMLTISSKRKEQSLFSPCHESIRTRGKDDSIAGRASDRVDALARAADEAQVAELRVGCLPPTSSNQKQRTEQQAVAGFLAPRHRTGRAATAMVEVEESVATVEETVAEVELPVEEVEERQVLKVASHRSKLKNFPECQIPEQVRRIVQDFHVMDFVGCSLTMLDASLLSASVERWHLETSSFHLPFGEMTVTLDDVDALFHILIASTFFTPVYRDQATAVLMVMDALEVDEVVVLSEFGETRGFHLRMSCLRRIYQELVHADRYQAVARA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05932 469 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05932 469 Pfam Plant mobile domain 355 399 IPR019557 -
Vivi1g05932 469 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 207 - -
Vivi1g05932 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 51 63 IPR008271 GO:0004672|GO:0006468
Vivi1g05932 469 Pfam Protein kinase domain 4 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05932 469 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05932 469 SUPERFAMILY Protein kinase-like (PK-like) 3 203 IPR011009 -
Vivi1g05932 469 FunFam Leucine-rich repeat receptor-like protein kinase 7 217 - -
Vivi1g05932 469 Gene3D Transferase(Phosphotransferase) domain 1 7 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05932 Vivi-Chr1 131048078 131052609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05932 3 207 Receptor kinase-like Gene Family AT1G75820 51.415 2.81e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi1g05932 Pkinase 1.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05932 - - vvo:131654149 867.07