Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05931 ATGCTAATATGCTATCTATTCATTCTTTACCATTATCATATTATCAAGTTGTCAGCTCTATGCACCTTCCCATTATCATGGGAAGTTTCACTCCTCTTCTCGATATTCCTCAAAATTTTGCATGTTTTAATGAATCTTCTAGTGCTTTGGTTCTTTCTTCTTCCAAGAAGGAAAATAAAAATAGTTAGTGTTTCACCTCTAATAGAACCCTGTGCAGAATTTGCATGTGCAAATATGGAGAAAAATGTATATGCATTGTTTCTGATGTTGTTGATATTTACTCTTATTGTCTGTCTCTCTGAAGGGCTTAATGCAGAGGGAAAATATCTTATGGATATAAAGGGGAAATTGTTTGACAGATACAGTCATCTTGAGAATTGGAATCCAAGTGATTCAACACCTTGTGGTTGGAAAGGTGTCATCTGCAACAGTGACATCAATCCATTGGTTGAATCTCTTGACTTGCATGCAATGAATCTCTCAGGCTCTTTATCTTCCAGCATTGGTGGTTTGGTTCACTTGCTTCACCTTAATTTATCTCAGAACTCTTTCTCTGGTTTTATACCAAAGGAGATTGGAAACTGCTCAAGCTTGCAGGTTCTTACTCTCAACATTAATCAATTTGAAGGTCAAATTCCCGTCGAAATAGGCCGGCTTTCGAATTTAACTGAGTTGCATCTTTCCAACAACCAGCTCTCAGGAACTTTTCCGGACGAAATTGGTAACCTTTCTTCACTCTCGATATTTACTACTTACACAAATCACCTCAGCGGATCCTTGCCGGCTTCTATCGGGAACCTTAAAAGATTGATTCGGTTTCGAGCCGGACAGAATATGATCTCGGGAAGTTTACCTCATGAGATAGGTGGATGTGAAAGCTTGGAGTATCTTGGTTTAACTCAAAATCAGATAAGTGGTGAAATACCGAAAGAACTCGGACTACTCAAGAACTTGCAATGTTTGGTCCTTAGGGAAAATGATCTTCATGGTGCTATACCTAAAGAGCTTGGAAACTGTACAAGTTTGGAGGTTCTTGCACTATATCAGAACAATCTTGTGGAAGAAATTCCAAAGGAGCTTGGAAACCTTGAATTCCTAAAGAGACTATACCTTTACAGGAATGAGTTGACAGGAAATATTCCAAAGGAGATTGGAAACCTTTCTGTTGCAATTGAGATTGATTTTTCGGAGAATCTTCTTACAGGAGAGATACCGATCGAGTTGGTTAATATCAAAGGCTTGCAACTGCTTCATCTCTTCGAGAACAAGCTAACCGGCACAATTCCGAATGAGTTCACAACTTTGAAAAACCTAACTCAGCTTGATCTCTCTATCAATCACCTCAACGGTACTATTCCGATTGGATTTCAGGATTTGACCAAACTGTCCTCATTGCAACTCTTCAACAACTCATTAAATGGTAGAATTCCTTATGCACTTGGAGCAAATAGTCCACTTTGGGTGCTTGATTTGTCGTTCAACAACTTAGTCGGAAGAATTCCGATTCATCTTTGCCAACAGTCTCACTTGATGATGCTGAACTTAGGATCAAACAAACTCGCCGGAAATATACCTTCTAGAATTACAAGCTGCAAGTCTTTGGTGTATCTTCGCCTCTTCGGTAACAACTTGAGGGGCAAGTTTCCTTCAAATTTATGCAAGCTTGTAAATCTTTCTACAGTTGAGTTGGAACAGAATGAATTCACTGGCCCCATTCCTCCACAAATTGGTAACTTCCCAAACTTGCAAAGACTTCACCTTTCTAACAACCGCTTTTCGGCTGAATTGCCGAAAGAAATCGGTAACCTCTCTCAGTTGGTATCCTTTAATGTCTCATCAAATCATCTTTTCGGTAGACTGCCTACGGAACTTTTCAACTGCAGGAAGCTCCAAAGACTCGACCTCAGCAACAACGGCTTCGTAGGTACTTTATCAGGTGAGATCGGAACTCTTTCACAGCTAGAGCTTCTAAGGCTCTCGAATAACAATTTTTCTAGTAAAATTCCATCAGAAATCGGAAAACTCTTGCGGTTGACCGAACTACAAATGAGCGAAAACTCATTTTGTGGTTATATTCCACATGAGTTAGGTGCACTCGCATCCCTGCAAATTGCACTTAATCTCAGCTATAATAAACTTTCTGGCCAAATACCTTCTCAACTTGGGAATCTTATCATGCTAGAATCTCTCCAACTCAACAACAATCACTTGAGCGCCGAAATTCCAAACTCCTTTAACAGACTTTCTAGTTTACTTTCTTTCAACTTTTCATACAACGATCTTTTCGGCCCTTTACCTTCTTTACCTCTCTTTCAAAACTCCACATTCAGTTGCTTTTCAGGTAACAAAGGACTATGTGGAGGACTTCTTGTCCTTTGTCAAAGTTCAACATCACATTCCCCTCCAAATAAACTAGGAAAAATTCTAGCTATAGTTGCAGCTATTGTTAGTGGAGTTTCATTGATTTTAATTCTGGTTATCATATATCTAATGAAAAATCTCACTGTGCCAAACCAAGATATAGTTAAACCGAATTCTCCAAATGTTTCAAACATGTACTTTTTTCCGAAAGAGGAGTTGAATTTCCAAGACATGGTTGAAGCCACCGAAGATTTTCATTCCAAATACGAAATCGGAAAAGGCGGCAGTGGAACTGTGTACAGAGCAGATATATCAAATGATCCTAATCATATAAACACAATTGCTGTAAAGAAACTTACATCAAACAGTAACAGCATTGATTTAAACGGTTGCTTCCGCGCTGAAATCTTAACTTTGGGCAAAATAAGGCATAGCAATATTGTGAAGTTATACGGTTTCTGCAACTACAGCGGCTCTAATATGCTACTTTATGAACACATGGAAAAGGGTAGTTTAGGAGAGTTACTTCATGGAGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTAGGATTGCTCTAGGAACTGCACAAGGACTATCTTATTTGCACCATGATTGCAAGCCGAGGATTATCCACCGCGATATCAAGTCCAATAACATACTTATTGACCATGAATTCGAAGCTCATGTTGGTGATTTCGGTTTGGCTAAACTTATCGATATCTCAAAGTCGAAGTCAGTGTCTGCAGTTGTTGGCTCTTATGGCTACATTGCCCCTGAGTATGCATACACAATGAAAGTCACAGAAAAATGTGATGTATACAGCTATGGAGTAGTCCTATTGGAGTTACTAACAGGGAAGAAGCCAATCCAGTCATTGGATCAAGGTGGTGGAGATCTTGTAACATGGGTGACAAATCATATCAACAAATATTCATTGAAACTAGACATCATTGATGCAAAATTGGACCTACTAGATGAAATTGATGTTGCTCAAATATTTGATGTCTTGAAAATTTCTTTACTTTGCACCGACGCGTATCCTTCTAGACGACCGACCATGCGTAAGGTTGTTGCAATGCTTACAAGCTCTAGTAAAAGGAAAGAGCAATCTTTGTTCTCTCCATGTCATGAATCAAGTAATGTTGAAGAATGA 3519 0.3896 MLICYLFILYHYHIIKLSALCTFPLSWEVSLLFSIFLKILHVLMNLLVLWFFLLPRRKIKIVSVSPLIEPCAEFACANMEKNVYALFLMLLIFTLIVCLSEGLNAEGKYLMDIKGKLFDRYSHLENWNPSDSTPCGWKGVICNSDINPLVESLDLHAMNLSGSLSSSIGGLVHLLHLNLSQNSFSGFIPKEIGNCSSLQVLTLNINQFEGQIPVEIGRLSNLTELHLSNNQLSGTFPDEIGNLSSLSIFTTYTNHLSGSLPASIGNLKRLIRFRAGQNMISGSLPHEIGGCESLEYLGLTQNQISGEIPKELGLLKNLQCLVLRENDLHGAIPKELGNCTSLEVLALYQNNLVEEIPKELGNLEFLKRLYLYRNELTGNIPKEIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFENKLTGTIPNEFTTLKNLTQLDLSINHLNGTIPIGFQDLTKLSSLQLFNNSLNGRIPYALGANSPLWVLDLSFNNLVGRIPIHLCQQSHLMMLNLGSNKLAGNIPSRITSCKSLVYLRLFGNNLRGKFPSNLCKLVNLSTVELEQNEFTGPIPPQIGNFPNLQRLHLSNNRFSAELPKEIGNLSQLVSFNVSSNHLFGRLPTELFNCRKLQRLDLSNNGFVGTLSGEIGTLSQLELLRLSNNNFSSKIPSEIGKLLRLTELQMSENSFCGYIPHELGALASLQIALNLSYNKLSGQIPSQLGNLIMLESLQLNNNHLSAEIPNSFNRLSSLLSFNFSYNDLFGPLPSLPLFQNSTFSCFSGNKGLCGGLLVLCQSSTSHSPPNKLGKILAIVAAIVSGVSLILILVIIYLMKNLTVPNQDIVKPNSPNVSNMYFFPKEELNFQDMVEATEDFHSKYEIGKGGSGTVYRADISNDPNHINTIAVKKLTSNSNSIDLNGCFRAEILTLGKIRHSNIVKLYGFCNYSGSNMLLYEHMEKGSLGELLHGESSSSLDWYSRFRIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSVSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPIQSLDQGGGDLVTWVTNHINKYSLKLDIIDAKLDLLDEIDVAQIFDVLKISLLCTDAYPSRRPTMRKVVAMLTSSSKRKEQSLFSPCHESSNVEE 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05931 1172 FunFam Piriformospora indica-insensitive protein 2 356 454 - -
Vivi1g05931 1172 ProSiteProfiles Protein kinase domain profile. 872 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05931 1172 SMART serkin_6 872 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05931 1172 Gene3D Ribonuclease Inhibitor 102 253 IPR032675 -
Vivi1g05931 1172 Pfam Leucine rich repeat N-terminal domain 104 143 IPR013210 -
Vivi1g05931 1172 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 103 259 - -
Vivi1g05931 1172 Gene3D Ribonuclease Inhibitor 254 504 IPR032675 -
Vivi1g05931 1172 Gene3D Phosphorylase Kinase; domain 1 838 953 - -
Vivi1g05931 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 998 1010 IPR008271 GO:0004672|GO:0006468
Vivi1g05931 1172 FunFam Leucine-rich repeat receptor protein kinase MSP1 838 953 - -
Vivi1g05931 1172 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 260 353 - -
Vivi1g05931 1172 SMART LRR_typ_2 603 627 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 171 195 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 724 747 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 459 483 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 219 243 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 315 339 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 363 387 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 579 602 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 651 675 IPR003591 -
Vivi1g05931 1172 SMART LRR_typ_2 435 458 IPR003591 -
Vivi1g05931 1172 Gene3D Ribonuclease Inhibitor 619 704 IPR032675 -
Vivi1g05931 1172 Gene3D Ribonuclease Inhibitor 505 618 IPR032675 -
Vivi1g05931 1172 Pfam Protein kinase domain 872 1145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05931 1172 ProSitePatterns Protein kinases ATP-binding region signature. 878 905 IPR017441 GO:0005524
Vivi1g05931 1172 Gene3D Transferase(Phosphotransferase) domain 1 954 1168 - -
Vivi1g05931 1172 SUPERFAMILY Protein kinase-like (PK-like) 847 1149 IPR011009 -
Vivi1g05931 1172 Gene3D Ribonuclease Inhibitor 705 793 IPR032675 -
Vivi1g05931 1172 FunFam Leucine-rich repeat receptor-like protein kinase 954 1164 - -
Vivi1g05931 1172 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 483 797 - -
Vivi1g05931 1172 SUPERFAMILY RNI-like 152 496 - -
Vivi1g05931 1172 PANTHER UNNAMED PRODUCT 86 185 - -
Vivi1g05931 1172 SUPERFAMILY RNI-like 417 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05931 Vivi-Chr1 131033785 131038334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05931 128 1149 Receptor kinase-like Gene Family AT1G73080 37.918 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi1g05931 Pkinase 5.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05931 - - vvo:131644205 2217.58