Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05814 ATGCTAACTCGTTTGTTTCTCTTCTATTCTTACATTTTTGTCTCTCTCTTTTTCATTGAGGGAGCTCAATTTACCACAAATGATGAACTCTCAACTCTTCTCACAATCAAGTCAAGTTTCATTGATCCAATGAATCATCTCAAGGATTGGCACATACCGAGCAACGCGACCCAACGGCTCCATTGTAACTGGACCGGAGTCGGTTGCAACACGAAAGGCTTTGTAGAGAGTCTAGAACTCTACAACATGAACTTAAGTGGCATTGTTTCAAACCATGTTCAATCTCTTTCAAGTTTATCTTATTTCAACATAAGCTGTAACAACTTTGCTTCATCGCTTCCGAAATCACTTTCCAACCTCGCTTTTCTAAAGAGCTTTGATGTGAGCCAAAACTACTTCACTGGTGGATTTCCTATCGGATTCGGAAGATCTGCTGAGTTGAGATCAATCAATGCGTCAAGCAATGAATTTTCAGGTCTTCTTCCTGAGGATATTGGAAATGCAACGTTGCTCGAAAGCCTGGATTTTCGAGGAAATTACTTTGTAAGTCCAATTCCAATGAGTTTTACAAATTTGCAAAATCTTAAATTTCTAGGCCTTTCGGGAAATAATTTCACAGGCAAGATTCCAGAATATCTCGGTGAACTAAACTCGCTAGAGACATTGATTATGGGATACAATGAGTTTGAAGGTGAGATTCCTGCAGAATTCGGTAACATGACAAATCTTCAATATCTTGATTTGGCTGTAGGAACTCTCAGTGGACAAATTCCACCTGAACTAGGTAAGCTCAAGAAACTCGCTACGATTTACTTATACCGAAACAAATTCACTGCGAAAATTCCACCTCAAATTGGCAATATTATGTCACTAGAATTTCTAGATTTCTCTGATAATCAGATCACAGGAGAAATACCAGAAGAACTTGCTAAGTTGGAAAATTTGCAGCTTTTGAATTTAATGAGTAATAAACTAACTGGTCATGTACCAGAAAAGCTTGGTGAATTGAAAAACTTACAGGTTCTTGAATTATGGAAAAATTCTTTAGAAGGCTCTTTGCCAATGAGCCTTGGAAGAAATTCTCCTTTGCAGTGGTTAGACGTGTCGTCTAACTCGTTGTCTGGTGAGATTCCTCCGGGTTTATGTACAACAGGCAATCTCACTAAGCTGATTCTCTTTAACAATTCATTCTCCGGTAACATTCCGACCGGACTTTCAAACTGTTCGTCGTTGGTGCGTGTTCGGATTCAAAACAACGTTATTTCAGGAACTATTCCAGTTGGATTCGGCAATCTTCCGAGCCTACAACGGCTGGAATTGGCGAAGAACAATCTCACTGGGCAAATTCCTATAGATTTAACCTCTTCCACATCACTTTCCTTCATAGATGTATCTTGGAATCGCCTTGAGTCATCATTACCTTCAGAAATTTTGTCTATTCCATCTCTGCAAATCTTCATTGCCTCTCACAACAACTTTGGAGGTACTATCCCTGATGAGTTCCAGGGATGTCCATCTCTCTCTGTGCTTGATCTTTCAAGTGCGAATATCTCCGGTGCAATCCCGGAAAGTATTGCTTCTTGTACAAAACTAGTTAACCTTAACCTTAGAAACAATCATTTGACAGGTGGAATACCAAAATCACTCACAAACATGCCTACTTTATCTGTTCTTGACTTGTCCAACAATTCACTGACTGGTCGGATACCTGAAAACTTCGGAAACTCCCCGGCTCTCGAAACGATGAACCTGTCCTATAACAAACTGGAAGGGTCAGTACCTTCAAATGGGATTCTACTTACCATGAATCCTAACGATTTTATTGGTAATGCTGGTCTTTGCGGAGGCATTCTCCCTCCATGTTCTCGGAGCTCGACTGTGACAAGCCAGAAGAGGAGCTCACACATTAGTCATGTTGTTATTGGTTTTTTGACCGGAATTTTGGTTATTTTGTCTCTTGCTGCAGCATATTTTGGAGGCAGATGGTTATACAATAGATGTTATTTGCGTAACAATTTCATCTATGATTGGTTCAAACAAGGCAATGAAGATTGGCCTTGGAGGTTAGTAGCATTTCAAAGGATCAGTTTTACAAGTAGTGAGATACTGACTTGCATAAAGGAATCAAATGTCATAGGTATGGGTGGTGCTGGCATTGTTTACAAAGCTGAAATCCATAAACCTCAGATAACGGTAGCAGTGAAGAAACTATGGAGGTCAAGCACAGACATAGAAATTGGTGGGAATGATGTCTTAAGAGAAGTGGAACTCTTGGGAAGATTGAGGCACAGGAATATCGTAAGACTATTAGGGTATGTTCACAATGAAAGAGATGTGATAATGGTTTATGAGTACATGTCTAATGGAAACCTTGGAACAGCACTGCATGGTGAAGAATCTGCAAGGTTGCTTGTAGATTGGGTTTCAAGGTATAACATAGCAGTTGGAGTTGCTCAAGGGATGAACTATCTACATCATGATTGTCATCCATCAGTCATTCACAGGGATATCAAGTCTAATAACATACTCCTTGACGCGAATTTGGAGGCAAGGATAGCAGACTTCGGTTTGGCAAGGATGATGATTCAAAAGAATGAGACTGTTACAATGGTGGCTGGATCTTATGGTTACATTGCACCAGAATATGGATACACTCTGAAGGTAGATGAGAAGATTGACATATACAGTTATGGAGTGGTACTTTTGGAGCTGCTAACTGGTAAAATGCCATTAGACCCTACATTTGAAGAAGCCGTGGACATAGTCGAATGGATACGAAAGAAGAAAAACAATAAAGCCTTGTTAGAAGCACTAGATCCGACCATAGCTGGTGAGTGCAAATATGTACAAGAAGAAATGCTTCTTGTGCTCAGGATTGCACTTCTATGTACTGCAAAACTTCCGAAGGAAAGACCATCCATGAGAGACATCATCACAATGCTTGGAGAAGCAAAGCCAAGAAGGAAAAGCATTTGTGGTAATGGAAGACAAGAGAGTAGCAGGGAAAAGGGGACAATCTTTACCACATCCCCAGTAGCAAGTCTTTTGTAG 3051 0.4022 MLTRLFLFYSYIFVSLFFIEGAQFTTNDELSTLLTIKSSFIDPMNHLKDWHIPSNATQRLHCNWTGVGCNTKGFVESLELYNMNLSGIVSNHVQSLSSLSYFNISCNNFASSLPKSLSNLAFLKSFDVSQNYFTGGFPIGFGRSAELRSINASSNEFSGLLPEDIGNATLLESLDFRGNYFVSPIPMSFTNLQNLKFLGLSGNNFTGKIPEYLGELNSLETLIMGYNEFEGEIPAEFGNMTNLQYLDLAVGTLSGQIPPELGKLKKLATIYLYRNKFTAKIPPQIGNIMSLEFLDFSDNQITGEIPEELAKLENLQLLNLMSNKLTGHVPEKLGELKNLQVLELWKNSLEGSLPMSLGRNSPLQWLDVSSNSLSGEIPPGLCTTGNLTKLILFNNSFSGNIPTGLSNCSSLVRVRIQNNVISGTIPVGFGNLPSLQRLELAKNNLTGQIPIDLTSSTSLSFIDVSWNRLESSLPSEILSIPSLQIFIASHNNFGGTIPDEFQGCPSLSVLDLSSANISGAIPESIASCTKLVNLNLRNNHLTGGIPKSLTNMPTLSVLDLSNNSLTGRIPENFGNSPALETMNLSYNKLEGSVPSNGILLTMNPNDFIGNAGLCGGILPPCSRSSTVTSQKRSSHISHVVIGFLTGILVILSLAAAYFGGRWLYNRCYLRNNFIYDWFKQGNEDWPWRLVAFQRISFTSSEILTCIKESNVIGMGGAGIVYKAEIHKPQITVAVKKLWRSSTDIEIGGNDVLREVELLGRLRHRNIVRLLGYVHNERDVIMVYEYMSNGNLGTALHGEESARLLVDWVSRYNIAVGVAQGMNYLHHDCHPSVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVTMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPTFEEAVDIVEWIRKKKNNKALLEALDPTIAGECKYVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSICGNGRQESSREKGTIFTTSPVASLL 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05814 1016 ProSiteProfiles Protein kinase domain profile. 706 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05814 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 26 179 - -
Vivi1g05814 1016 MobiDBLite consensus disorder prediction 997 1016 - -
Vivi1g05814 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 363 625 - -
Vivi1g05814 1016 Gene3D Transferase(Phosphotransferase) domain 1 790 1003 - -
Vivi1g05814 1016 Pfam Leucine rich repeat 530 589 IPR001611 GO:0005515
Vivi1g05814 1016 Pfam Leucine rich repeat 410 469 IPR001611 GO:0005515
Vivi1g05814 1016 SUPERFAMILY L domain-like 61 315 - -
Vivi1g05814 1016 SMART serkin_6 706 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05814 1016 Pfam Leucine Rich repeat 289 305 IPR001611 GO:0005515
Vivi1g05814 1016 Gene3D Ribonuclease Inhibitor 163 255 IPR032675 -
Vivi1g05814 1016 Gene3D Ribonuclease Inhibitor 256 360 IPR032675 -
Vivi1g05814 1016 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Vivi1g05814 1016 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 287 356 - -
Vivi1g05814 1016 Gene3D Ribonuclease Inhibitor 28 145 IPR032675 -
Vivi1g05814 1016 Pfam Protein kinase domain 708 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05814 1016 Gene3D Ribonuclease Inhibitor 361 625 IPR032675 -
Vivi1g05814 1016 FunFam MDIS1-interacting receptor like kinase 1 790 1000 - -
Vivi1g05814 1016 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 236 982 - -
Vivi1g05814 1016 MobiDBLite consensus disorder prediction 989 1016 - -
Vivi1g05814 1016 SUPERFAMILY RNI-like 233 585 - -
Vivi1g05814 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Vivi1g05814 1016 SUPERFAMILY Protein kinase-like (PK-like) 707 979 IPR011009 -
Vivi1g05814 1016 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 180 280 - -
Vivi1g05814 1016 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Vivi1g05814 1016 SMART LRR_typ_2 432 456 IPR003591 -
Vivi1g05814 1016 SMART LRR_typ_2 264 288 IPR003591 -
Vivi1g05814 1016 SMART LRR_typ_2 192 216 IPR003591 -
Vivi1g05814 1016 SMART LRR_typ_2 312 336 IPR003591 -
Vivi1g05814 1016 SMART LRR_typ_2 552 575 IPR003591 -
Vivi1g05814 1016 SMART LRR_typ_2 96 120 IPR003591 -
Vivi1g05814 1016 FunFam MDIS1-interacting receptor like kinase 1 706 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05814 Vivi-Chr1 128187564 128191060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05814 2 1016 Receptor kinase-like Gene Family AT1G08590 62.186 0.0 1263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi1g05814 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05814 - - gmx:100793873 1632.08