Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05793 ATGATCATGCAAAAGAGTTTATGTTTTCTACTTGTTATATTCTATGTACCTATTTTGTTACATGCACAAAACAAAGTTGAACCTTTGATATTAGGATGTGGAATAGGTGATAATGGTGGTAAAGATCCTGATGGAAAACAATGGAGTCCAGATAATAAATATCTTTCGCCAACAAATTCAATAACAACAAAAGCTTTGTTTCAAGATCCTTCACTTACATCGGAAATTCCATACATGACAGCGCGAATTTTCACAACCGAAGCAACGTATAAGTTTCCAATTCAACCTACTAAACGTTACTGGCTTAGGCTCCATTTTTATCCAACGGTTTACAACAATTTCAACCCGGCCGATTCATATTTTTCTGTGAAAGCGAACGATGTTATACTTCTCAACAATTTCAGCTCCTCGATTACGTGTCAGGCTTTGTCACAGGCTTATATTGATAAGGAATATGCACTTGCACCTTTGAATGCTGATGTTCTTAGCCTTACTTTCAAGCCTTCTGATAAGCACAATGGTGCTTTTGCTTTTATCAATGGTATTCAGCTTGTAGAAATGCCTGACTTGTTGCTCAAGTCACCTTCTTTGGTCGGTTATGCAGATCAAACCACGGATACAACGGGTTTTCATCTTCAAACGATGTTTAGAATAAACGTTGGGGGACAATATATATCTCCGGCTCAAGATTCTGGTTTGAGTCGAACATGGTACGATGATACTCCGTATGTTTATGGTGCTTCCACTGGTGTTACGAATCGCGCTACAAAGGATGTTAAAATCGATTACCAAACTACGCCTCCATATATTGCACCTGTTGATGTTTATTCAACATATAGATCCATGGGAGGTGATTCAGATCTTAACATGAAGTACAATCTCACATGGATTTTTCAAGTTGATCCGAGTTCAATGTACTTATTAAGGTTGCATTTTTGTGATTTCTATTATACTAAAGTGAATGAAATTGTTTTCAACATCTTTATCAACAATCAAACGGCCGAGGATATGGCTGATGTGATAGGTTGGTCGGGCGGTAAAGGAATGACCACTTATAAGGATTACGTTATTTATGTTCATGATGGGCCGGGCGAGGATCAACTATGGCTTGCAATCAATCCTGCGGCCAAGTTAAAGCCGAAATTTTACGATGCTTTACTCAATGGTGTTGAGATATTTAAACTTAATGAAACTGATCTGTCTGGACCTAATCCTAGCCTTTCTGATATGATGACCAAACATGAGGAAAAGGCAAGAACTTTTCAAAAGAAAAATAGCCGTAGTACGACTTTCGCTATCGGCGGAGCTGCTGGTGGAGCTGCTGGTTTTGCATTAGTTGCTGCTATATGTGTTGCAGTTCATCAAAGAAAGAAGAGAGCACCAGGTTCATACACAAATAACACATCAAGTTGGTTGCCTCTATATGGAAATTCTCACACGAGCGGAACGAAATCGACAGGATCAGGGAAGAGTACTATGGGGAGTGGTGCAAACTTGGCCATGGCGCAAGGATTGTGTCGATATTTTTCTTTACAAGAGATGATACAAGCGACAAAGAATTTCGACGAGGCGAATGTGATAGGAGTTGGAGGATTTGGAAAGGTTTACAAGGGAGTTATTGATAATGGAGTAAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACTGAAATCGAGATGCTTTCGAAGCTTAGACACAAACATTTAGTGTCTTTGATTGGTTTTTGTGAGGAGGATGAGGAAATGTGTTTGGTTTATGATTACATGGCTCATGGAACCATGAGGGAGCATCTATACAAAGGAAACAAACCTATAGATACTTTATCATGGAAACAAAGGTTGGAGATTTGCATTGGTGCTGCAAGAGGGCTTCATTACCTTCATACAGGAGCAAAGTATACAATCATTCATAGAGATGTTAAAACAACAAATATCCTTCTTGATGAAAACTTTGTTGCCAAGGTTTCGGATTTTGGATTGTCGAAAACAGGTCCAAACATGAACAATGGTCATGTTAGCACAGTTGTGAAAGGTAGTTTTGGATATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTTTACTCGTTCGGAGTAGTTCTATTCGAGGCACTGTGTTCGCGGCCTGCTTTGAATCCTGGCCTTCCAAAGGAACAGGTTAGTCTTGCAGATTGGGCTTTGCTCAACAAAAGAAAAGGAACATTGGAGGATATTATTGATCCAAATTTGAAAGGAAAGATTAACCCTGAAAGCTTGATCAAGTTTGCTGATGCGGCTGAAAAGTGTTTGTCTGATCATGGACTCGCCCGTCCCTCGATGAATGATCTGTTGTGGAACCTTGAATTTGCTCTCAACCTACAAGAGAATCCCGATGGTTCGCGATCGACTCATGGCAACTCTCCGCGTATAGACGAGACTGAATTTGAAGAGGTAAATTTGGCACACAAGAGTGACATGGCAGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCTCAGTCATGATGACTCAACTGAGAATTCTGCTGCCATCTTCTCTCAAATCGTTAATCCGAAAGGGCGATGA 2610 0.3981 MIMQKSLCFLLVIFYVPILLHAQNKVEPLILGCGIGDNGGKDPDGKQWSPDNKYLSPTNSITTKALFQDPSLTSEIPYMTARIFTTEATYKFPIQPTKRYWLRLHFYPTVYNNFNPADSYFSVKANDVILLNNFSSSITCQALSQAYIDKEYALAPLNADVLSLTFKPSDKHNGAFAFINGIQLVEMPDLLLKSPSLVGYADQTTDTTGFHLQTMFRINVGGQYISPAQDSGLSRTWYDDTPYVYGASTGVTNRATKDVKIDYQTTPPYIAPVDVYSTYRSMGGDSDLNMKYNLTWIFQVDPSSMYLLRLHFCDFYYTKVNEIVFNIFINNQTAEDMADVIGWSGGKGMTTYKDYVIYVHDGPGEDQLWLAINPAAKLKPKFYDALLNGVEIFKLNETDLSGPNPSLSDMMTKHEEKARTFQKKNSRSTTFAIGGAAGGAAGFALVAAICVAVHQRKKRAPGSYTNNTSSWLPLYGNSHTSGTKSTGSGKSTMGSGANLAMAQGLCRYFSLQEMIQATKNFDEANVIGVGGFGKVYKGVIDNGVKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDYMAHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPNMNNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPGLPKEQVSLADWALLNKRKGTLEDIIDPNLKGKINPESLIKFADAAEKCLSDHGLARPSMNDLLWNLEFALNLQENPDGSRSTHGNSPRIDETEFEEVNLAHKSDMAAHYKNLSLGSEHDLSHDDSTENSAAIFSQIVNPKGR 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05793 869 FunFam receptor-like protein kinase FERONIA 483 596 - -
Vivi1g05793 869 PANTHER OS07G0166700 PROTEIN 505 800 IPR045272 GO:0004714|GO:0006468
Vivi1g05793 869 SUPERFAMILY Protein kinase-like (PK-like) 501 796 IPR011009 -
Vivi1g05793 869 Gene3D Transferase(Phosphotransferase) domain 1 597 812 - -
Vivi1g05793 869 FunFam FERONIA receptor-like kinase 210 396 - -
Vivi1g05793 869 FunFam Receptor-like protein kinase FERONIA 597 810 - -
Vivi1g05793 869 Pfam Malectin-like domain 32 394 IPR024788 -
Vivi1g05793 869 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Vivi1g05793 869 Gene3D - 211 396 - -
Vivi1g05793 869 Gene3D - 31 188 - -
Vivi1g05793 869 Pfam Protein tyrosine and serine/threonine kinase 525 722 IPR001245 GO:0004672|GO:0006468
Vivi1g05793 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Vivi1g05793 869 ProSiteProfiles Protein kinase domain profile. 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g05793 869 CDD STKc_IRAK 527 794 - -
Vivi1g05793 869 Gene3D Phosphorylase Kinase; domain 1 484 596 - -
Vivi1g05793 869 FunFam FERONIA receptor-like kinase 28 188 - -
Vivi1g05793 869 SMART serkin_6 521 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05793 Vivi-Chr1 127886684 127890165 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05793 27 869 Receptor kinase-like Gene Family AT3G51550 53.089 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi1g05793 Malectin_like 2.6e-36 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05793 - - gmx:100791236 1326.61