Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05765 ATGGATAGGGTATTCTCCGTAGATGAAATCCCCGAACACTTCTGGTCACCGCCGATTCACGTCTCCGGCGACGATGAATCCTCTAAGATGAGCCGCAGTGCTTCCGAGTGGGCTTTTCAACGCTTCCTCCAAGAAGCTTCGGTTTCTGCCACATCTCCTCCTCCTTCTTCCCCTCTTGCTGATGTGGATACTCAGTCTAAACCCACTACCATCGCACCAATGGACGCCGGAGTTTTGTCCAATGGACATCCGCATCCTCCTCCTCCGGTGGCCGTTGATTCCGAGGAATATCGGGCTGTGTTGAAGAGTAAGCTTAATCTCGCGTGCGCTGCGGTGGCCATGACTAGGGGTTCTTTGCCTAAATCTCAAGATCCAGCCTCTTTTCCTGAGAATGGATCACAGTCTTCTAATCCTACTCAAGTTGGATCTCAGCCCGTTTTTGAAGGATCTGCTCCTTCTGGAAACGATCCACCTGTATTACAAGATAAAGATGCCAAAGTATCACCTGCGATCCCTTCCATACCTCCTGTGCAGAAAAAAACTGTTGTTGCAATTAGACCATCAACAAGTGGATCATCAAGAGATCTGTCAGATGATGACGAAGCTGAGGGAGAGACAGATATGAATGACAACACAGACCCAGCTGACGTAAAACGAGTAAGGAGGATGCTTTCCAATAGAGAGTCTGCAAGACGCTCAAGACGAAGAAAGCAGGCTCATTTAACCGAGTTGGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTTCCTTGGTAAAGCGCCTCTCTGATGTGAGCCAAAAGTACACTGATTCTGCTGTTGACAACAGAGTACTGAAAGCTGATGTCGAAACCTTGAGAGCAAAGGTGAAAATGGCTGAAGAGACCGTCAAAAGAATTACTGGATTGAATCCGATGTTTCACGTCATGCCTGATATATCATCAATGGGCATGCCACCATTTGATGGAAGCCCTTCAGACAATTCAGCTGATGCAGCTGTTCCTGTGCAAGATGATCCACATCATCACTTCTATCAACCCGGGTCTAACAATCCTATTCCATGTCACGAAATGAGAGTCAACAATGGGTTGGGAGAAATTTCTTCGATTGAAAATGCTCCGCAGAATAATGCAGCAGTTGTAGGTGGTGGTAACAAGGCGGGCCAAACAGCTCCTCCCGTGCACCGGGTGGCTAGCTTGGAACATCTTCAGAATCGGATTCGTGGAGGCGCCGATTCTTGTGGACCTTCTAATGGGGAGCAGTAA 1266 0.4771 MDRVFSVDEIPEHFWSPPIHVSGDDESSKMSRSASEWAFQRFLQEASVSATSPPPSSPLADVDTQSKPTTIAPMDAGVLSNGHPHPPPPVAVDSEEYRAVLKSKLNLACAAVAMTRGSLPKSQDPASFPENGSQSSNPTQVGSQPVFEGSAPSGNDPPVLQDKDAKVSPAIPSIPPVQKKTVVAIRPSTSGSSRDLSDDDEAEGETDMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLVKRLSDVSQKYTDSAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHVMPDISSMGMPPFDGSPSDNSADAAVPVQDDPHHHFYQPGSNNPIPCHEMRVNNGLGEISSIENAPQNNAAVVGGGNKAGQTAPPVHRVASLEHLQNRIRGGADSCGPSNGEQ 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05765 421 MobiDBLite consensus disorder prediction 120 150 - -
Vivi1g05765 421 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Vivi1g05765 421 FunFam BZIP transcription factor 216 267 - -
Vivi1g05765 421 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Vivi1g05765 421 Pfam Basic leucine-zipper C terminal 285 411 IPR020983 -
Vivi1g05765 421 MobiDBLite consensus disorder prediction 46 92 - -
Vivi1g05765 421 Pfam bZIP transcription factor 217 269 IPR004827 GO:0003700|GO:0006355
Vivi1g05765 421 Gene3D - 217 271 - -
Vivi1g05765 421 CDD bZIP_plant_GBF1 219 269 IPR045314 GO:0003700|GO:0006355
Vivi1g05765 421 Coils Coil 276 296 - -
Vivi1g05765 421 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 268 IPR004827 GO:0003700|GO:0006355
Vivi1g05765 421 PANTHER BASIC LEUCINE ZIPPER 63 1 411 - -
Vivi1g05765 421 Coils Coil 227 261 - -
Vivi1g05765 421 MobiDBLite consensus disorder prediction 117 247 - -
Vivi1g05765 421 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 221 236 IPR004827 GO:0003700|GO:0006355
Vivi1g05765 421 MobiDBLite consensus disorder prediction 211 227 - -
Vivi1g05765 421 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05765 Vivi-Chr1 127173426 127177577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05765 1 307 bZIP Transcription Factor Family AT4G02640 43.293 4.46e-54 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi1g05765 bZIP_C 5.8e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05765 K25784 - gmx:100170702 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g05765 1 127173426 127177577 Vivi1g05765 1 127173426 127177577 ECH
Vivi6g05084 6 155081602 155083868 Vivi1g05765 1 127173426 127177577 PCT