Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05737 ATGTTTTCACCATTAGTTTCTTGGATTTTGTCAACCTCATCCTCTTCCTCATCATCATCATCTGAAGAAGAAGAACATGAACCTGAAAATCTTGACATTAGCAATGACGAATCAGACTACGAAAACTTTCCAACAGACAATGTTGAAGACCAAATCGATGATGTGGACGATGAGAATATTGATGACACCATTCCCATTGGACTTGCCATTTCTGATACCTCCCCCGCGGTAACCGTGGCCTTGCCTGCCCCTACAGATTACACAAACACTGCCACCACTTCTAAAGAATCGCGCTCCAAACGACATCACAACAAGTATTCTGGTGGGGTGAGACAATATCAACGGATATGGACTAAGCAAGATGAGATAGAATTATTGAAGGGATATCTGGATTACATCAAGCAACAAGGAAGAACAACCACCACTCTTCAAAGTGACGTAGCATCGTTCTATGATCAAGTTACGCCCAAATTCAGAGCGGATTTCAATAAGAACCAGATTGTTGAGAAGCTACGTAGGTTAAAAAGAAAACACAAGATGGTTTTGGATAAATGCAAAGAGGTTCAGGTTTCTTTCAAAAGCTCCCATGAACAAGCCGTTTTTGAAATTTCTCACAAGATTTGGGGCAATGACACAGACCATGATGTTTTGGATGTTGATGAATCAAGACCGGTTCCTGACAGTCCTGATCTTATTGACAATATTAAGATGAAAGCCGAACATGTTGACAATTGCGAAGAAACAGATAAAAGGGCGCCAAAGCGTCCAAGGCTCGCAGCAGACAATGGTGATGCTACTAGTAGTATACATGGATTCATTGAGGAAACCATGAGGTCTTGTTTCTCACCATTGCTGAAGGAACTACTGGATGATGCTCCGGTAGAGCCACTCGACGTGTTGCCAATGTTGTTATCCACCGAGGAAGAGAGGGACGAACAACGGTTAAAACGGAGGATTTTGGAGTTAGAGGTGTATTTGAATCGGTTGGAGTTGTTGCAGGGTCAGATCAAGGCTAGGTTGGAGGGTTTGAGGTCTAGCTTAGGTTGA 1047 0.4279 MFSPLVSWILSTSSSSSSSSSEEEEHEPENLDISNDESDYENFPTDNVEDQIDDVDDENIDDTIPIGLAISDTSPAVTVALPAPTDYTNTATTSKESRSKRHHNKYSGGVRQYQRIWTKQDEIELLKGYLDYIKQQGRTTTTLQSDVASFYDQVTPKFRADFNKNQIVEKLRRLKRKHKMVLDKCKEVQVSFKSSHEQAVFEISHKIWGNDTDHDVLDVDESRPVPDSPDLIDNIKMKAEHVDNCEETDKRAPKRPRLAADNGDATSSIHGFIEETMRSCFSPLLKELLDDAPVEPLDVLPMLLSTEEERDEQRLKRRILELEVYLNRLELLQGQIKARLEGLRSSLG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05737 348 MobiDBLite consensus disorder prediction 1 58 - -
Vivi1g05737 348 MobiDBLite consensus disorder prediction 243 258 - -
Vivi1g05737 348 Coils Coil 303 323 - -
Vivi1g05737 348 MobiDBLite consensus disorder prediction 42 58 - -
Vivi1g05737 348 PANTHER BNAANNG10740D PROTEIN-RELATED 13 340 IPR007592 GO:0006355
Vivi1g05737 348 MobiDBLite consensus disorder prediction 1 19 - -
Vivi1g05737 348 MobiDBLite consensus disorder prediction 243 263 - -
Vivi1g05737 348 Pfam Protein of unknown function, DUF573 114 209 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05737 Vivi-Chr1 126195412 126196458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05737 69 345 GeBP Transcription Factor Family AT5G28040 32.578 6.87e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi1g05737 DUF573 1.1e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05737 - - vvo:131627402 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05048 6 154745742 154747614 Vivi1g05737 1 126195412 126196458 PCT