Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g05729 ATGGCTCTTTCCCAAGAAATTGAATCCTCATTTCCCTCTCTGACTTTCCAAATACGAAGAACCCAACCAGAGCTAATCCCTCCAGCCTCACCCACTCCCCACGAAACCAAACTCCTCTCCCACATAGACCAACAACCTGGCCTTCGTGCAAATATTCCAATCATACAATTCTACCGTAACCAGCCTTCAATGGCAGGGAAAGATCCCGTTAAAGTCATAAGAAACGCAATTGCACAAGCACTTGTATTTTACTACCCACTCGCGGGTAGAGTTAAGGAAGCTTCTGGTGGTGAACTTGTGGTGGATTGTAATGAAGAAGGAGTGATGTTTATTGAAGCTGATGCTGACGTCACGCTTGAACAATTTGGTGAAATTAAACCGCCGTTTCCGTGTTTAGAAGAACTGCTTTATGATGCTGCGGTTCCGGAGGGTGTTCTGAATACTCCCATCCTACTTATACAGGTAACACGTTTGAAATGTGGCGGTTTCATCTTTGCTCTTCGATTCAACCACACCATGGTAGACGGAGTAGGCATTGTTCATTTCATCTTATCGGTAACAGAAATAGCCAAAGGTGCAAAACAACCTTCAATTCTACCCTCATGGAACAGAGAGCTTCTCCGCGCAAGAGATCCTCCACGCGTCACATTCAACCACCGCGAATACGAACAACTCACAGACATTCAAACCGACACCGCTTTCACCTCAACAAAATTCTCCGAACAATCTTTCTTCTTCGGTTCAAACGAGATATCCGCACTACGAAGCTTACTCCCACGCGATCTGGAAAGCGCGTCAACAACCTTTGAAATCCTCACATCATACATCTGGCGTTGCCGCACGAGAGCGTTGGGGTTAAATCCAACCGAAGAGATCCGAATGATGTGCATCGTGGACGCGCGTGGTAAATTCGATCCTCCGATTCCAATCGGTTACTACGGAAGCTGTTTCGCTTTCCCAGCGGCGGTTACAATCGCGGGAGAGCTTAGTGAAAAACCGTTAGAGTTTGCGGTGGAGTTGATAAAGGAAGCTAGTAGTGAAGTGAGTGAGGAGTATATGCATTCTGTGGCGGATCTAATGGTGAGTGAAGGAAGGCCAATGTTTACTGTGGTGAGGTCGTGTCTTGTGTTGGATACGACTGATGGTGGATTTAGAAACTTGGATTTTGGTTGGGGGAAAGCGGTGTATGGTGGAATTGCGAAACCTGGTGCTGGGAGTTTTCCTTATGTGCATTTTCATGTTCCGGGTCAGAATGCAAAAGGAGAGGAAGGGATATTTGTTTTGATTTCTTTGCCTACTGAAATTATGACAGCTTTTGTTAAAGAGTTGAATGAGTTGATTGTTTAA 1347 0.4558 MALSQEIESSFPSLTFQIRRTQPELIPPASPTPHETKLLSHIDQQPGLRANIPIIQFYRNQPSMAGKDPVKVIRNAIAQALVFYYPLAGRVKEASGGELVVDCNEEGVMFIEADADVTLEQFGEIKPPFPCLEELLYDAAVPEGVLNTPILLIQVTRLKCGGFIFALRFNHTMVDGVGIVHFILSVTEIAKGAKQPSILPSWNRELLRARDPPRVTFNHREYEQLTDIQTDTAFTSTKFSEQSFFFGSNEISALRSLLPRDLESASTTFEILTSYIWRCRTRALGLNPTEEIRMMCIVDARGKFDPPIPIGYYGSCFAFPAAVTIAGELSEKPLEFAVELIKEASSEVSEEYMHSVADLMVSEGRPMFTVVRSCLVLDTTDGGFRNLDFGWGKAVYGGIAKPGAGSFPYVHFHVPGQNAKGEEGIFVLISLPTEIMTAFVKELNELIV 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g05729 448 Gene3D - 222 443 IPR023213 -
Vivi1g05729 448 Pfam Transferase family 18 444 - -
Vivi1g05729 448 Gene3D - 13 221 IPR023213 -
Vivi1g05729 448 PANTHER ACYL TRANSFERASE 4 16 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g05729 Vivi-Chr1 126091791 126095643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g05729 25 446 Monolignol Biosynthesis Gene Families AT5G48930 29.587 5.09e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g05729 K19861 - gmx:100820325 635.95